| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1111 |
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| Symbol | |
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| ID | 5190605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1253944 |
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| End bp | 1254690 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585569 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001266456 |
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| Protein GI | 148546354 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.619698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACA ACTGGGACTG GGGCGTGTTC TTCAAGTCCA CCGGCGTGGG CAGCGAAACC
TATCTGGACT GGTACATCAC CGGCCTGGGC TGGACCATCG CCATCGCCAT CACCGCCTGG
ATCATCGCGC TGCTGCTGGG GTCAGTCCTC GGTGTCATGC GTACCGTACC GAACCGCCTG
GTATCGGGTA TCGCCACCGC CTACGTGGAA CTGTTCCGCA ACGTGCCACT GCTGGTGCAA
CTGTTCATCT GGTACTTCCT GGTACCGGAC CTGCTGCCAG AAGGCTTGCA GGAATGGTTC
AAGCAGGACC TCAACCCGAC CACTTCGGCG CTGATCAGCG TGGTCATCTG CCTGGGCCTG
TTCACCGCCG CACGCGTCTG TGAGCAAGTG CGTACCGGTA TCCAGGCGCT GCCCAAAGGC
CAGGAAGCTG CCGCCCGCGC CATGGGCTTC AGCCTCCCGC AGATCTACAA CAATGTGCTG
CTGCCGCAGG CCTACCGGAT CATCATTCCG CCGCTCACCT CCGAGTTCCT CAACGTGTTC
AAGAACTCCT CGGTGGCGTC GCTGATCGGC CTGATGGAGC TGCTGGCGCA GACCAAACAG
ACCGCAGAGT TTTCCGCCAA CCTGTTCGAG GCGTTCACTT TGGCCACGCT GATCTACTTC
ACCCTGAACA TGGGCCTGAT GCTGCTCATG CGCATGGTCG AGAAGAAAGT CGCCGTGCCT
GGCCTGATCT CCGTGGGGGG CAAGTAA
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| Protein sequence | MNYNWDWGVF FKSTGVGSET YLDWYITGLG WTIAIAITAW IIALLLGSVL GVMRTVPNRL
VSGIATAYVE LFRNVPLLVQ LFIWYFLVPD LLPEGLQEWF KQDLNPTTSA LISVVICLGL
FTAARVCEQV RTGIQALPKG QEAAARAMGF SLPQIYNNVL LPQAYRIIIP PLTSEFLNVF
KNSSVASLIG LMELLAQTKQ TAEFSANLFE AFTLATLIYF TLNMGLMLLM RMVEKKVAVP
GLISVGGK
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