| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1110 |
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| Symbol | |
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| ID | 5192397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1253272 |
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| End bp | 1253943 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585568 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001266455 |
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| Protein GI | 148546353 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.632611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGG ATTTCAGCGA AATCATCCCC GCCCTGCCTG CCCTCTGGGA GGGCATGGTC
ATGACCCTCA AACTGATGGT CATGGGCGTC ATCGGCGGTA TCGTGCTGGG CACCATCCTG
GCCCTGATGC GCCTGTCGTC GAGCAAACTG CTGTCGAACC TGGCCGGTGC CTACGTCAAC
TACTTCCGCT CGATCCCGCT GCTGCTGGTG ATCACCTGGT TCTACCTGGC GGTGCCGTTC
GTGCTCCGCT GGATCACCGG CGAAGATACC CCGGTGGGTG CCTTCACCTC CTGCGTGGTC
GCCTTCATGA TGTTCGAGGC CGCGTATTTC TGCGAAATCG TCCGCGCCGG TGTGCAGTCG
ATCTCCAAGG GCCAGATGGG CGCCGCACAA GCGCTGGGCA TGAACTACGC GCAGACCATG
CGCCTGATCA TCCTGCCCCA GGCCTTCCGC AAGATGACCC CGCTGCTGCT GCAGCAGAGC
ATCATCCTGT TCCAGGACAC CTCGCTGGTA TACACCGTGG GCCTGGTCGA CTTCCTCAAC
TCGGCACGCT CCAACGGCGA CATCATCGGG CGCTCCCATG AGTTCCTGAT CTTCGCCGGC
GTCGTCTACT TCCTCATCAG CTTCTCCGCT TCGTGGCTGG TCAAGCGCCT GCAAAAAAGG
ATCACCGTAT GA
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| Protein sequence | MEMDFSEIIP ALPALWEGMV MTLKLMVMGV IGGIVLGTIL ALMRLSSSKL LSNLAGAYVN
YFRSIPLLLV ITWFYLAVPF VLRWITGEDT PVGAFTSCVV AFMMFEAAYF CEIVRAGVQS
ISKGQMGAAQ ALGMNYAQTM RLIILPQAFR KMTPLLLQQS IILFQDTSLV YTVGLVDFLN
SARSNGDIIG RSHEFLIFAG VVYFLISFSA SWLVKRLQKR ITV
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