| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1108 |
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| Symbol | |
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| ID | 5192827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1250568 |
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| End bp | 1252472 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585566 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001266453 |
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| Protein GI | 148546351 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.287066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCG ATCCCTCGCT ACTTCGCCCT GCCAAGCCTG CCGTGAATTC CCGCCTGATC
CGTCAATTGC TGTTACCACC ACTGATCATC CTGCTGATGG TCGGCCTGGG AATGGCTGGC
TACCTGATCA GCGAGAGCAA TGGTATCCGC GCCCTCAGCG AAAACGGCGA ACGCCAGCTG
GAGCTGCATG CACGCACGGT CGAAAGCGAA ATCAGCAAGT ACACCTACTT GCCGAGCCTG
CTGGAGCTGG AAGACAGCGT CTCGCACCTG CTCACCGACC CGGACGGCGC TTCACGCCAG
ACGGTCAACG AATACCTTGA AGGCCTGAAC CGTCGCAGTC GCAGTCGGGC CATCTTCGTC
CTCGACACCA ATGGCCGGGT GCAGGCCACC AGCAACTGGC GCGATGCCGA CTCGTTCCTG
GGTGAAGACC TGTCGTTCCG CGCCTACTTC CAGACTGCCG TGCGCGGCGA GCCCGGGCGT
TTCTATGGCA TCGGCAGTAC CACTGGCGAG GCTGGCTATT ACCTGGCCCA TGGCCTTGAG
GAGCACGGCA AGATCATAGG CGTTGCGGTG ATCAAGGTGC GCCTGGACAC CCTCGAGGAG
CGCTGGCAGC GTGCCCGCCT GGAGGCGTTC GTCAGCGACG AGAATGGCAT CATCATTCTC
TCCAGCGACC CGGCCCGGCG TCTTAAGTCG GTGCGCCCGC TGACCCCGCA AATCAAAGAG
CGCCTGGCGC GAAGCCTGCA ATACTACTGG TGGCCGCTGA ACGAATTGCA GCCTCTGGCC
CGGGAAACCC TGGCCGATGG TGTGGAAAAG CTGACCTTCC CGGCCAACAC CGAAACCGCT
CATGGCAAAC CGCACGAAGT GGCCTACCTG GCGCAAACCA GGCGCCTGGT CGACACGCCC
TGGCATTTCA CCCTGCTGAC CCCACTGCAG GACCTGCGTC GCGAATCCAT GGTGCAGGGC
ATTCTGGTGG GCGTGGCCTT TGCCTTGCTG GCGATCCTCG GCATTGCCTG GAACGAGCGG
CGCAAAGTGA TCGCCACACG CCTGGCGGCC CGCGAAGCCC TTGAAGAGGC CAACAGCCAG
CTGGAGCGGC GGATTGCCGA ACGCACCGCC GACCTGCGCG CCAGCAACGA ACGCCTCAAG
GGCCAGATTC GCGAGCGCCG GCATGCCGAA CAGACCTTGC GCCACGCCCA GGATGAGCTG
GTGCAAGCAG GTAAGCTGGC CGCCATCGGG CAAATGTCTA CCAGCATTGC CCACGAGCTG
AACCAACCCT TGGCTGCGCT GCGCACCTTG TCTGGCAATA CGGTGCGCTT CCTTGAGCGC
GGGGCGCTGG AAACCGCCAG CACCAACCTG CGCACCATGA ATGACCTGAT CGACCGCATG
GGCCGCATCA CCGCCAGCCT GCGCTCGTTC GCCCGGCGCG GCGATGACAG CGGCCAGGCT
TCACTGGCCA AGGCGGTAGA GGCCACCCTG CAGGTGCTGG CCAACCGCGT CAGTGCCTGT
CACTTGCAAT TGCACCATCA GTTCGAGGAC CAGCAACTGG CCATCGACCA AACCCGCCTG
GAGCAGATTC TGGTCAACCT GATCGGCAAC GCCCTTGACG CGATGGCCGC GCAACCGCAG
CCTGAGCTGT GGCTGGAAGG CGAGTTGCAG GGCGACAAGT ACCGTTTGCA GGTGCGCGAC
AACGGCCACG GTATTGACGC CGAAGCGCGC AAGCACCTGT TCGAACCCTT CTTTACCACC
AAACCGGGCG AGCATGGCCT GGGCCTGGGC CTGACCTTGT CGGCTTCCCT TGCCGCCGCC
GCCAAGGGAA GCCTCAACGT CGAGCATCCC GCCACCGGCG GCACAGCCTT CGTCCTGGCC
TTGCCCCTGG TTTCCCCCCC TAGCGAATCG GCAGAGCATC CATGA
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| Protein sequence | MKCDPSLLRP AKPAVNSRLI RQLLLPPLII LLMVGLGMAG YLISESNGIR ALSENGERQL
ELHARTVESE ISKYTYLPSL LELEDSVSHL LTDPDGASRQ TVNEYLEGLN RRSRSRAIFV
LDTNGRVQAT SNWRDADSFL GEDLSFRAYF QTAVRGEPGR FYGIGSTTGE AGYYLAHGLE
EHGKIIGVAV IKVRLDTLEE RWQRARLEAF VSDENGIIIL SSDPARRLKS VRPLTPQIKE
RLARSLQYYW WPLNELQPLA RETLADGVEK LTFPANTETA HGKPHEVAYL AQTRRLVDTP
WHFTLLTPLQ DLRRESMVQG ILVGVAFALL AILGIAWNER RKVIATRLAA REALEEANSQ
LERRIAERTA DLRASNERLK GQIRERRHAE QTLRHAQDEL VQAGKLAAIG QMSTSIAHEL
NQPLAALRTL SGNTVRFLER GALETASTNL RTMNDLIDRM GRITASLRSF ARRGDDSGQA
SLAKAVEATL QVLANRVSAC HLQLHHQFED QQLAIDQTRL EQILVNLIGN ALDAMAAQPQ
PELWLEGELQ GDKYRLQVRD NGHGIDAEAR KHLFEPFFTT KPGEHGLGLG LTLSASLAAA
AKGSLNVEHP ATGGTAFVLA LPLVSPPSES AEHP
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