| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1106 |
|---|
| Symbol | |
|---|
| ID | 5193029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1248884 |
|---|
| End bp | 1249219 |
|---|
| Gene Length | 336 bp |
|---|
| Protein Length | 111 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640585564 |
|---|
| Product | GlpM family protein |
|---|
| Protein accession | YP_001266451 |
|---|
| Protein GI | 148546349 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3136] Uncharacterized membrane protein required for alginate biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.659945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.196215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACCTGG TATTCAAAGC GGCCCTGGGC GCAGGCGTGG TGCTGTTGCT GGCGGTGCTG
TCGAAAACGC GCAACTACTA CATCGCGGGG CTGGTGCCGC TGTTCCCCAC CTTTGCCCTG
ATTGCCCACT ACATCGTCGG CAAGGGGCGC AGCATTGCCG ACCTCAAGAC CACCATCCTG
TTTGGCATGT GGTCGATCAT TCCGTATTTC GTGTACCTGG CAACCCTGTA TGTACTGGTC
GACCGCTTGC GCCTCGAGGC ATCGATGGCG CTGGCCACGC TGGCCTGGCT GATCGCCGCG
ACTGTGCTGG TGACTGTGTG GGTGCGGATG CACTGA
|
|---|
| Protein sequence | MDLVFKAALG AGVVLLLAVL SKTRNYYIAG LVPLFPTFAL IAHYIVGKGR SIADLKTTIL
FGMWSIIPYF VYLATLYVLV DRLRLEASMA LATLAWLIAA TVLVTVWVRM H
|
|---|
| |