Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1098 |
Symbol | |
ID | 5193334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1234314 |
End bp | 1234859 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585556 |
Product | PadR-like family transcriptional regulator |
Protein accession | YP_001266443 |
Protein GI | 148546341 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.216996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAAC ATCCCCCTCA TGATCCCTTC GAGCGGCGCC CCGCCCGTGG CGAGCGCGGC CCGCGTGTCT TCGCCCCGGG TGACCTCAAG CTGCTGATGC TGGACTTGCT GGCCGAGCAG CCCGGCCACG GTTACGACCT GATCCGCCAG ATCGAAAATC TGTTCGACGG CAGCTACAGC CCAAGCCCTG GGGTGATCTA CCCCACGCTG AACTTCCTCG AAGAGGCCGA ACTGATCAGC GGCCAGGTAC AAGGCAGCAA ACGCCTCTAC GCCATCACCG ATGCCGGCCG CAGCGCCTTG GTGGATCAGG CAGTAGCCCT GGATGGCGTG CGCATGCGCA TCGAGGTCAG CAAACGCGCC CTGCGCGGCC ACGACCGCCC GCCAGAGATT CATGAAGCGG TCGGCAACCT GCGCCATGCA CTGCACATGC ACAGCGGCCG CTGGACAGTG GAAGAAATCG AACGGGTCCG TGACCTGCTC AACCATACCG CCAAGGCCAT CGCCTCCGGG CCCACCGAAC CTTTCAGGGA GACGCCCCAT GAGTGA
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Protein sequence | MREHPPHDPF ERRPARGERG PRVFAPGDLK LLMLDLLAEQ PGHGYDLIRQ IENLFDGSYS PSPGVIYPTL NFLEEAELIS GQVQGSKRLY AITDAGRSAL VDQAVALDGV RMRIEVSKRA LRGHDRPPEI HEAVGNLRHA LHMHSGRWTV EEIERVRDLL NHTAKAIASG PTEPFRETPH E
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