| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1093 |
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| Symbol | |
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| ID | 5190175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1230561 |
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| End bp | 1231151 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640585551 |
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| Product | hypothetical protein |
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| Protein accession | YP_001266438 |
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| Protein GI | 148546336 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.377212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.221471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACC GCCAGGCAGG TCTGACCCTG ATCGAACTGA TGGTCGCGCT GGCCCTGACG
GCCGTGCTCG GCATCATGCT GGCCGCCCTG GTCAACGGCT GGCTGAAGGT GCGCGAACGC
TTGCAGGACA CCATTCGGCA AACCTCGGTG CTGGACTTTT GCCTGGCCCT GGAGCGGCGC
TTCGACAGCC CGGTGCTGCG CCGTGTCTAC GACCAGCGTC TGCCGCTGGC CAGCCGTTGG
CTGGACTGGC AGCCCGCCAG CAACCAGTTG CTGTGGGTCG CCAGCACCGG CCTGCCGGCA
GCCGAAGGTG GCTCGCGCCT GCAACGCCAG CGCCTGCGGT TCGAGGCCCG GGAGCAACGC
CTGCTGCTGG AAAGCTCGGC GGACTTGTAC GCCGCCGTCG CCCCGCGCTG GGTACAGCGC
GAACGACTCG ACCAGGTCAG CGCCATGAAC GTTCTGTACT ACCAGGGCGG CCGCTGGCTG
GCCTGGCCTT CTGACCAACC GGTGCACCCA GGCCGTGGTG TGCGTCTGGA ACTGCTGCGT
GATGGAGCCC CCTATGTCTG CACCTTCGCC CTTCCATGGG GGCGCTCATG A
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| Protein sequence | MKHRQAGLTL IELMVALALT AVLGIMLAAL VNGWLKVRER LQDTIRQTSV LDFCLALERR
FDSPVLRRVY DQRLPLASRW LDWQPASNQL LWVASTGLPA AEGGSRLQRQ RLRFEAREQR
LLLESSADLY AAVAPRWVQR ERLDQVSAMN VLYYQGGRWL AWPSDQPVHP GRGVRLELLR
DGAPYVCTFA LPWGRS
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