Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1083 |
Symbol | |
ID | 5192330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1219444 |
End bp | 1220409 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640585541 |
Product | general secretion pathway protein K |
Protein accession | YP_001266428 |
Protein GI | 148546326 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGAA GGCAACAGCA GGGTGCGGCC CTGTTGATGG TGATGGTGGT GCTGGCAATG CTGGCGGCGG GCATGGCCTG GCTGGTGGAA GATGGCCGGC GTCAGGTCGA CGAAGTGCGC CTGCTGCACC AGCGAGTGCA GGTGCGGGCC ATGGAGCAGG CCGGCCTGGC CTATGCCGGG CAGGCCCTGC GTGACCCCGC CTGGCGGCTC AGTCCGCTGT TCTGGCAAGC CTTGCGTGGG CAGCCGCTTA ACTACGATTT TGGCGCTGGC CAGGCGCAGT TGCGGGTACG CGACCAGCAC ACCTGCTTCA ACGTCAATGC GTTGCTGGGG GCCGATGGCG AACGCGCCGA GCGCCAGTTG CGTTACTTGC TGGGCAATGA CATGGCGGCC GAACGCCTGG TCGATGCTTT GGCCGACTGG CTCGATGCCG ACAGTGATGC CCGCCTGCAG GGCGCCGAGA GCGCCCAGTA CCTGCGTCAG CAACCGCCAC GGCTGGCGGC TGACCAGCCG ATGCTCGACA CCAGCGAGCT GAACCTGTTG CTGGAGCCGG ACGCCAGCCG CCAGGCGCGT TACCCGATGC TGTGCGCCTT GCCCCAGACC ACGGGTTGGC GGCTCAACGC CAACGCGCTG GGGTTGGAGC ATCTGCCCCT GCTGGAGGCG CTGTATGAAG GGCGTTACTC GCGTTCGTTG CTCAGCCGCA TTGTCAGCGG CAGGCCGGCG TCGGGGTATG TGGACGCGGC TGCACTGCGT CAGGCGCTTG GGGCGGTGGA TGACGAAACG TTCGAACGGT TGAGCGAAGG GCTGCTGCTC AACAGCGGGC ATTTTCTGTT GCAGCTGTCG TTCGAGGAAG AGGGGCGGGT GATGCGCAGC GAGTTCCAGG TGGAGGCGCT GGGGGTGGTG CAATGGCATG CCCGGGTGCC CGCGCAGCAA GTGCGGGTGC GTAGCCGGGA GCCAATAGCC TGGTAA
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Protein sequence | MGGRQQQGAA LLMVMVVLAM LAAGMAWLVE DGRRQVDEVR LLHQRVQVRA MEQAGLAYAG QALRDPAWRL SPLFWQALRG QPLNYDFGAG QAQLRVRDQH TCFNVNALLG ADGERAERQL RYLLGNDMAA ERLVDALADW LDADSDARLQ GAESAQYLRQ QPPRLAADQP MLDTSELNLL LEPDASRQAR YPMLCALPQT TGWRLNANAL GLEHLPLLEA LYEGRYSRSL LSRIVSGRPA SGYVDAAALR QALGAVDDET FERLSEGLLL NSGHFLLQLS FEEEGRVMRS EFQVEALGVV QWHARVPAQQ VRVRSREPIA W
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