Gene Pput_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1079 
Symbol 
ID5190763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1217602 
End bp1217913 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content65% 
IMG OID640585537 
Producthypothetical protein 
Protein accessionYP_001266424 
Protein GI148546322 
COG category[S] Function unknown 
COG ID[COG3323] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.313952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACAAGC TCGCCTTCTT CGTCCCCGCC AGCCATGTCG AAGTGGTCAA GGCCGCTGTG 
TTCGCTGCTG GCGGCGGGCG CATCGGTGAC TATGAGCACT GCGCCTGGCA AACCCTTGGC
CAGGGCCAGT TCCGCCCGTT GGACGGCAGC CAGCCGTTCC TCGGGCAAAC CGGCCAGGTC
GAGGTGGTGG AAGAGTGGAA GGTGGAGCTG GTGGTGGCTG ACGAGCTGAT TGTGCAGGTC
GTCGCTGCGC TCAAGCAGAG CCACCCGTAC GAGACGCCAG CCTATGAAGT CTGGCGGCTC
GCCGAGTTCT AG
 
Protein sequence
MYKLAFFVPA SHVEVVKAAV FAAGGGRIGD YEHCAWQTLG QGQFRPLDGS QPFLGQTGQV 
EVVEEWKVEL VVADELIVQV VAALKQSHPY ETPAYEVWRL AEF