| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1077 |
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| Symbol | |
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| ID | 5194802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1211904 |
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| End bp | 1213361 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585535 |
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| Product | putative transglycosylase |
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| Protein accession | YP_001266422 |
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| Protein GI | 148546320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0564532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCC ACACTGCTTT GCGCCAGCGT TGCGCCAAAT GGCTTCTCGC AACCGGACTC
TTTCTGCTGC TAGGTGCCTG CGTTGAAAAA CCCAGCACCC TCGAGCGCGT GAAGGAGGAT
GGCGTGCTGC GCGTGATCAC ACGCAACAGC CCGGCAACCT ACTTCCAGGA CCGTAACGGC
GAAACCGGCT TCGAGTACGA ACTGGTCCAG CATTTCGCCG ACGATCTCGG CGTAAAGCTG
CAGATCGAGA CCGCCGACAA CCTGGACGAG CTGTACGACG CCCTCGGCAA ACCTTCCGGC
CCGGTACTGG CTGCCGCTGG CCTGGTTAGC AGTGAGCGGC GCAAAACCCA GGTGAAATAC
TCCCATCCCT ATCTGGAGGT GACCCCGCAG GTCATCTACC GCAACGGCCG CGCGCGCCCC
ACCGGCGCCA AGGGTTTGGT CGGCAAGAAG ATCATGGTGC TCAAGGGCAG CAGCCATGCT
GACCAGTTGG CCGAGCTGAA AAAGCAGTAC CCTGCCTTGC AATATGAGGA ATCCGACGCC
GTCGAAGTGG TCGACCTGCT GCGCATGGTG GACGAAGGTC AGATCGACTT GACCCTGGTG
GACTCCAACG AACTGGCGAT GAACCAGGTG TATTTCCCCA ACGTGCGGGT CGCCTTCGAT
TTGGGCGACA CCCGCGACCA GCGCTGGGCA GTGGCAGCCG GCGAAGACAA CAGCCTGCTC
AACGAAATCA ACGAATTTCT CGACAAGGCA CAGAAAAACG GCACCCTTCA ACGCTTGAAG
GACCGCTACT ACGGCCATGT CGACGTGCTT GGCTATGTCG GCGCCTACAC CTTCGCCCAG
CACCTGCAAC AGCGCCTGCC CAAGTACGAG AAGCACTTCA AGAGCTACGC CAAGGTCGAG
CAGGTCGACT GGCGCCTGCT GGCCGCCATC GGCTACCAGG AATCGATGTG GCAGCCGGAA
GTCACCTCCA AGACTGGCGT GCGCGGCCTG ATGATGCTGA CCCAGCGCAC CGCCCAGGCC
ATGGGTGTGT CCAACCGCCT GGACCCGAGG CAGAGCATCC AGGGCGGCGC CAAGTACTTC
ATGAAGATCA AGGAAGAGCT TGACGACAGC ATTCAGGAAC CGGATCGCAC CTGGTTTGCC
CTGGCGGCCT ACAACGTCGG CAGCGGCCAC CTGGAAGACG CCCGTACCCT GGCCAAGCGC
GAGAAGCTCA ACCCGAACAA GTGGCTGGAC GTGAAGAAAA TGCTGCCGCG GCTGGCTCAG
AAGCAGTGGT ACCGGCAGAC CAAGTACGGC TATGCCCGTG GGGGCGAACC GGTGCATTTC
GTGGCCAACA TCCGTCGTTA CTACGACATC CTCACCTGGG TGACCCAGCC GCAGCTCGAA
GGCCAGGTGG CCGAGGGTAA CCTGCATGTG CCTGGGGTCA ACAAGGACAA GCCAGCGGAT
AAGTCGTCGC CGATGTAA
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| Protein sequence | MFAHTALRQR CAKWLLATGL FLLLGACVEK PSTLERVKED GVLRVITRNS PATYFQDRNG
ETGFEYELVQ HFADDLGVKL QIETADNLDE LYDALGKPSG PVLAAAGLVS SERRKTQVKY
SHPYLEVTPQ VIYRNGRARP TGAKGLVGKK IMVLKGSSHA DQLAELKKQY PALQYEESDA
VEVVDLLRMV DEGQIDLTLV DSNELAMNQV YFPNVRVAFD LGDTRDQRWA VAAGEDNSLL
NEINEFLDKA QKNGTLQRLK DRYYGHVDVL GYVGAYTFAQ HLQQRLPKYE KHFKSYAKVE
QVDWRLLAAI GYQESMWQPE VTSKTGVRGL MMLTQRTAQA MGVSNRLDPR QSIQGGAKYF
MKIKEELDDS IQEPDRTWFA LAAYNVGSGH LEDARTLAKR EKLNPNKWLD VKKMLPRLAQ
KQWYRQTKYG YARGGEPVHF VANIRRYYDI LTWVTQPQLE GQVAEGNLHV PGVNKDKPAD
KSSPM
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