| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1067 |
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| Symbol | xseA |
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| ID | 5194413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1199816 |
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| End bp | 1201207 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640585525 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_001266412 |
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| Protein GI | 148546310 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCTG CCATGATCAA AGACCCTTTC GAACGACTCG GGCTGGACCG CGAGGTCCTT
ACCGTCAGCC AACTCAACGG CCGCGCCCGC GTGCTGCTGG AAGACGTTTT CCGCAGCGTG
TGGGTGGAAG GCGAAATCTC CAACCTCGCC CGCCCGGCGT CCGGCCACAT GTACTTCACC
CTCAAGGACA GCGGCGCCCA GGTGCGTTGC GCGTTGTTCC GGCAGAACGC CACGCGGGTA
CGCCAGGCGC TGCGAGACGG CCTGGCGGTG CGGGTGCGCG GCAAGGTTTC GCTGTTCGAG
GGACGTGGCG ACTACCAGCT GATTCTCGAC ACCGTCGAGC CCGCCGGTGA TGGCGCGCTG
CGCCTGGCTT TCGAGGCCCT GAAGGATAAG CTCGGTGCCG AGGGACTGTT CAGCACCGAA
CGAAAGAAGC CACTGCCGGC TCACCCGCAG CGCATCGGCA TCATCACCTC GCCCACTGGC
GCGGTGATCC GCGACATCAT CAGTGTGTTC GGCCGCCGTG CCCCGCAGGT GGAGCTGAAC
CTGATCCCTA CGGCTGTACA GGGCCGCGAA GCCATCGCGC AGATCGTACG CGCCATCCGC
CTGGCCGACA GCCTCGGCTT CGATGCGCTG ATTCTGGCGC GTGGTGGTGG TTCGCTGGAA
GACCTGTGGT GTTTCAACGA GGAAGCCGTG GCGCGTGCCG TGGCCGCCTG CGTCACGCCA
ATTGTCAGCG CCGTGGGCCA TGAAACCGAC GTGTCGATCA GCGACTTCGT GGCTGACGTG
CGCGCGCCCA GCCCGTCGGC TGCCGCCGAG CTGCTGGCCC CTGACAACAG CGGCCTTCGG
CAACGCCTGG ATGGCCTGCA ACGGCGCCTG CTGCTGCGCA TGCAGAACCG CCTGACCCAC
GACCGCCTGC GCCTGGAGTC ACTCACCCGC CGCCTGCGTC ACCCAGGCGA GCGTTTGCGC
CAGCAGGCTC AACGCCTGGA CGACCTGGAC ATGCGCCTGC GTCGCGCGTT CATGCTCAAC
CTCAACCAGC GCCGCGAACG CCTGGCACGC CTGGACGCCC GCCTGGCCGC GCAGCATCCG
GGGCGTAACC TGAAACTGCT GAACCAGCGC CTGGACAGCC TGGCCGAGCG CCTGCCACGG
GCCATGCGTG AGGTGCTCAA GGACCGTCGC CAGCGGTTCC AGGCCCAGTT GCAGACACTG
CAGGTGGTCA GTCCGCTGGC CACCCTGGCC CGCGGATACA GCATTTTGCT GGATGAACAA
GGCCAGGCCA TTCGCAGCGC GGAACAGACC CGCAACGGCC AACGCCTGAC CGCCCGCCTG
AACGAAGGCG AGCTGCTGGT GCGGGTCGAA GACAACCACC TGACCCCGGT CACCCTCTCA
CTACTGGACT GA
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| Protein sequence | MMPAMIKDPF ERLGLDREVL TVSQLNGRAR VLLEDVFRSV WVEGEISNLA RPASGHMYFT
LKDSGAQVRC ALFRQNATRV RQALRDGLAV RVRGKVSLFE GRGDYQLILD TVEPAGDGAL
RLAFEALKDK LGAEGLFSTE RKKPLPAHPQ RIGIITSPTG AVIRDIISVF GRRAPQVELN
LIPTAVQGRE AIAQIVRAIR LADSLGFDAL ILARGGGSLE DLWCFNEEAV ARAVAACVTP
IVSAVGHETD VSISDFVADV RAPSPSAAAE LLAPDNSGLR QRLDGLQRRL LLRMQNRLTH
DRLRLESLTR RLRHPGERLR QQAQRLDDLD MRLRRAFMLN LNQRRERLAR LDARLAAQHP
GRNLKLLNQR LDSLAERLPR AMREVLKDRR QRFQAQLQTL QVVSPLATLA RGYSILLDEQ
GQAIRSAEQT RNGQRLTARL NEGELLVRVE DNHLTPVTLS LLD
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