| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1056 |
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| Symbol | |
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| ID | 5194661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1187664 |
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| End bp | 1188818 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585514 |
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| Product | ABC transporter related |
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| Protein accession | YP_001266401 |
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| Protein GI | 148546299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.112143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACGC TCGAACTTCG CAATGTGAAC AAGACCTACG GCAGCGGCCT GCCGGATACC
CTCAAGGACA TCCAGCTGTC GATCAAGGAC GGCGAGTTCC TGATCCTGGT GGGCCCGTCG
GGCTGCGGCA AGTCGACCCT GATGAACTGT ATCGCCGGCC TGGAGCAGAT CACCGGCGGC
GCCATCCTCA TTGACGAGCA GGACGTCAGT GGCATGAGCC CCAAGGACCG CGATATCGCC
ATGGTGTTCC AGTCCTATGC GCTGTACCCG ACCATGAGCG TGCGCGAGAA CATCGAATTT
GGCCTGAAGA TCCGCAAGCT GCCCCAGGCC GCCATCGATG AGGAAGTGGC GCGGGTGGCC
AAGTTGCTGC AGATCGAACA CTTGCTGGCG CGCAAGCCGG CGCAGCTGTC CGGCGGCCAG
CAGCAGCGCG TGGCCATGGG CCGGGCACTG GCGCGGCGAC CCAAGATTTA CCTGTTCGAT
GAACCCCTGT CCAACCTCGA TGCCAAGCTG CGGGTCGAAA TGCGCACCGA AATGAAGTTG
ATGCACCAGC GCCTGAAGAC CACCACGGTG TACGTCACCC ATGACCAGAT CGAGGCCATG
ACCCTGGGCG ACAAGGTGGC GGTGATGAAG GACGGCATCA TCCAGCAGTT CGGCACCCCG
CAGCAGATCT ACAACGACCC GGCCAACCAG TTCGTGGCCA GCTTCATCGG TTCGCCACCA
ATGAACTTCA TTCCGGTGCG TCTGGCCAGG CAGGACGGCC GCTTGCTGGC GTTGCTCGAC
AGCGGCCAGG CGCGCTGCGA GCTGCCCTTG GGGGGGGCTG CTGACGCGCT TGAGGGGCGC
GAGATCATCC TCGGCATCCG CCCTGAGCAG ATTGCCCTGG GCGCTGCTGA CGGCAATGGT
TTGCCGGCTA TCCGCGCCGA GGTGCAGGTC ACAGAGCCCA CCGGGCCGGA CCTGCTGGTG
TTCGTCACGC TCAACCAGAC CAAGGTGTGC TGCCGCCTGG CGCCAGATGT GGCGTGCCGG
GTGGGTGACA CCCTCAACCT GCAATTCGAC CCGGCCCGGG TGCTGCTGTT CGACGCTGCC
AATGGCGAGC GCCTGCACCT GGCCAGCACT GGCGCAACCG CAAAGGACAA CGTGGCTCAC
TTCAAAGGCC GTTGA
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| Protein sequence | MATLELRNVN KTYGSGLPDT LKDIQLSIKD GEFLILVGPS GCGKSTLMNC IAGLEQITGG
AILIDEQDVS GMSPKDRDIA MVFQSYALYP TMSVRENIEF GLKIRKLPQA AIDEEVARVA
KLLQIEHLLA RKPAQLSGGQ QQRVAMGRAL ARRPKIYLFD EPLSNLDAKL RVEMRTEMKL
MHQRLKTTTV YVTHDQIEAM TLGDKVAVMK DGIIQQFGTP QQIYNDPANQ FVASFIGSPP
MNFIPVRLAR QDGRLLALLD SGQARCELPL GGAADALEGR EIILGIRPEQ IALGAADGNG
LPAIRAEVQV TEPTGPDLLV FVTLNQTKVC CRLAPDVACR VGDTLNLQFD PARVLLFDAA
NGERLHLAST GATAKDNVAH FKGR
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