| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1055 |
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| Symbol | |
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| ID | 5194660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1186815 |
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| End bp | 1187660 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585513 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001266400 |
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| Protein GI | 148546298 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0252834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAGTC CTGTCGACAA GCCGGTGTTC AGCCTCAGCC GTATGGCCAT CCATGCCGTG
TTGCTGATCG CCGTGCTGCT GTATCTGGTA CCGCTGGTGG TGATGCTGCT GACCAGCTTC
AAGACCCCCG AAGACATCAG CACCGGCAAC CTGCTGAGCT GGCCTGCAGT GATTACCGGC
ATAGGCTGGG TCAAGGCCTG GGGAGCGGTC AGCGGTTACT TCTGGAACTC GATCATGATC
ACCGTGCCCG CGGTGCTGAT CTCCACCGCG ATTGGTGCAC TGAACGGCTA TGTGCTGTCG
ATGTGGCGCT TCCGAGGTTC GCAACTGTTC TTCGGCCTGC TGCTGTTCGG CTGTTTCCTG
CCGTTCCAGA CTGTGCTGCT GCCGGCCTCG TTCACCCTCG GCAAGCTTGG CCTGGCCAGC
ACCACCGGTG GCCTGGTGCT GGTGCATGTG GTCTACGGCC TGGCCTTCAC CACGCTGTTC
TTCCGCAACT TCTACGTGAG CATCCCCGAC GCATTGGTCA AGGCCGCACG GTTGGACGGC
GCCGGGTTCT TCACCATCTT CCGCCGCATC ATCCTGCCGA TGTCCACGCC GATCATCATG
GTCTGCCTGA TCTGGCAGTT CACCCAGATC TGGAACGACT TCCTGTTCGG CGTGGTGTTC
TCCAGCGGCG ACTCGCAACC GATTACCGTA GCCCTGAACA ATCTGGTCAA TACCAGTACC
GGGGCCAAGG AATACAACGT CGACATGGCG GCAGCAATGA TCGCTGGCCT GCCAACCCTG
CTGGTCTACG TGGTGGCAGG CAAATATTTC GTGCGCGGGC TGACGGCCGG CGCGGTCAAG
GGGTAA
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| Protein sequence | MHSPVDKPVF SLSRMAIHAV LLIAVLLYLV PLVVMLLTSF KTPEDISTGN LLSWPAVITG
IGWVKAWGAV SGYFWNSIMI TVPAVLISTA IGALNGYVLS MWRFRGSQLF FGLLLFGCFL
PFQTVLLPAS FTLGKLGLAS TTGGLVLVHV VYGLAFTTLF FRNFYVSIPD ALVKAARLDG
AGFFTIFRRI ILPMSTPIIM VCLIWQFTQI WNDFLFGVVF SSGDSQPITV ALNNLVNTST
GAKEYNVDMA AAMIAGLPTL LVYVVAGKYF VRGLTAGAVK G
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