| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1052 |
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| Symbol | |
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| ID | 5191988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1183133 |
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| End bp | 1184386 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585510 |
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| Product | N-acylglucosamine 2-epimerase |
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| Protein accession | YP_001266397 |
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| Protein GI | 148546295 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0420922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC TCAACCTGCC GCCCACCAGC TGGCTCAACG CCCCGGCCCA TACCGCCTGG
CGCCTGGCCG AAGCACAGCG CCTGCTGGCA TTCGCCAAAG CTGCGAAACT GCCTGACGGC
TTTGGCAACC TGGATGCCAA AGGCCAGCTC GCTCCTGGCG CCTGCGCCGA AACCATGAAC
ACCGCGCGAA TGACCCACTG CTTCGCCCTG GCCCATCTGC AGGGCATTCC CGGCAGCCTG
GCCTATGCCG AACACGGTGT GGCTGCCCTG CGTGGGGCCA TGCAGGACGC CAGCTACGGT
GGCTGGTTCG CCCACCCCGG CGGCCAGGAA GACAGCGGCA AGGCCGCCTA CCTGCATGCC
TTCGTCGCCC TTGCCGCCAG CTCTGCAGTG GTGGCCGGTG CAGCCGATGC CCAGCTGTTG
CTGGCCGATG CAACCGAGGT GATCGAAACG CACTTCTGGA GCGAAGCCAA GGGTGCCCTT
CGAGAGACCT TCTCTCGCGC ATGGCAACTG CCTGAGCCAT ACCGTGGCGC CAACAGCAAC
ATGCACGCGA CCGAGGCATT CCTGGCCCTG GCCGATGCCA CCGGCAACAG CCTTTGGCTG
CAACGCGCCT TGCGCATTGC TGAGCGCATT ATCCATACCC ATGCCGCCGC CAACGGTTAT
CGGGTCATCG AACATTTCGA CGCCCATTGG CAGCCGCTGC CGGATTACAA CCGCGAGCAC
CCCGCCGACC ACTTCCGGCC CTATGGCACT ACGCCCGGGC ATGCCATGGA GTGGGCACGG
CTCCTGTTGC ACCTGGAGGC CAGCCTGCAA CGGGCCGGGT TGCTCGCCCC GCAGTGGCTT
CCAGACAGTG CCTGCAGATT GTTCGATGCC GCCTGCCAGC ATGCCTGGAA CGTCGATGGC
GCTGCAGGTT TCGTCTACAC CCTGGACTGG GCCAATCGCC CGGTGGTGCA TGCACGCCTG
CACTGGGTGC ACGCCGAAGC TTGTGCCGCA GCAGCAGCCT TGTTGCAGCG CACCGGCGAA
GCTCAGTACG AGCAGTGGTA CCGCAACTGC TGGGGCTTTA TCGCCAACCA TTTCATCGAC
CCTGTCGCTG GCAGCTGGCA CCACGAACTC GATGCCCGCA ACCGGCCAGC GGGGACCATC
TGGCCGGGCA AACCCGACCT CTACCACGCC TACCAGGCGC TGCTGCTGCC AGGCTTGCCG
CTGGCACCCA GCCTGGCCAG CAACCTGGCC AGCTCCAGCT ATGTAACCAG ATGA
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| Protein sequence | MNTLNLPPTS WLNAPAHTAW RLAEAQRLLA FAKAAKLPDG FGNLDAKGQL APGACAETMN
TARMTHCFAL AHLQGIPGSL AYAEHGVAAL RGAMQDASYG GWFAHPGGQE DSGKAAYLHA
FVALAASSAV VAGAADAQLL LADATEVIET HFWSEAKGAL RETFSRAWQL PEPYRGANSN
MHATEAFLAL ADATGNSLWL QRALRIAERI IHTHAAANGY RVIEHFDAHW QPLPDYNREH
PADHFRPYGT TPGHAMEWAR LLLHLEASLQ RAGLLAPQWL PDSACRLFDA ACQHAWNVDG
AAGFVYTLDW ANRPVVHARL HWVHAEACAA AAALLQRTGE AQYEQWYRNC WGFIANHFID
PVAGSWHHEL DARNRPAGTI WPGKPDLYHA YQALLLPGLP LAPSLASNLA SSSYVTR
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