Gene Pput_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1049 
Symbolglk 
ID5194306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1179719 
End bp1180678 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content64% 
IMG OID640585507 
Productglucokinase 
Protein accessionYP_001266394 
Protein GI148546292 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0837] Glucokinase 
TIGRFAM ID[TIGR00749] glucokinase, proteobacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.531529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC TGCTGGTTGG TGATATTGGC GGCACCAATG CCCGTTTTGC GTTGTGGCGT 
GACAACCAGC TGCATGAGGT AAACGTTTTC GCCACCGCGG ACTACACCAA CCCCGAGCAG
GCCATCGAGG CCTACCTGGA AAGCCAAGGT ATCGCCCGTG GTGGCCTGGC GGCGGTGTGC
CTGGCGGTGG CCGGCCCGGT CGATGGCGAT GAATTTCGCT TCACCAACAA CCACTGGCGC
CTGAGCCGCA CGGCATTTTG CAAGACCTTG GAGGTCGAGC GACTGTTGCT GATCAATGAT
TTCACCGCTA TGGCGCTGGG CATGACGCGT CTGCGCGAAG GCGAGTTCCG CGAGGTGTGC
CCCGGCCAGG CCGACCCCTC GAGGCCGGCA CTGGTGATCG GGCCAGGTAC TGGCCTGGGT
GTGGGCTCGC TGCTGCGTCT GGGCGAACAG CACTGGAAGG CCCTGCCGGG TGAAGGCGGG
CATGTTGACC TGCCGGTAGG CAATGCTCGC GAAGCGGCAA TCCACCAGCA GATCCACAGT
CAGATCGGCC ATGTCAGCGC CGAGGCCGTT ATCAGTGGGG GGGGGCTGGT GCGGTTGTAC
CAGGCGATCT GTGCGCTGGA CGGCGACACG CCCAGGCACA AGACCCCGGC GCATATCACC
GACGCCGCAC TGGGCGGTGA GCCACGGGCG CTGGCGGTGG TCGAGCAGTT CTGTCGTTTC
CTTGGGCGCG TGGCGGGTAA CAATGTGCTG ACGCTGGGCG CGCGAGGCGG GGTCTATATT
GTGGGCGGTG TGATTCCGCG CTTTGCCGAG CTGTTCCTGC GCAGCGGGTT TGCCGCGAGT
TTTGCCGACA AGGGGTGTAT GAGTGGCTAT TTCACCGGGG TGCCGGTGTG GCTGGTGACG
GCGGAATATT CCGGGTTGGA GGGGGCAGGG GTAGCGTTGC AGCAGGCGTT GGATCACTGA
 
Protein sequence
MKHLLVGDIG GTNARFALWR DNQLHEVNVF ATADYTNPEQ AIEAYLESQG IARGGLAAVC 
LAVAGPVDGD EFRFTNNHWR LSRTAFCKTL EVERLLLIND FTAMALGMTR LREGEFREVC
PGQADPSRPA LVIGPGTGLG VGSLLRLGEQ HWKALPGEGG HVDLPVGNAR EAAIHQQIHS
QIGHVSAEAV ISGGGLVRLY QAICALDGDT PRHKTPAHIT DAALGGEPRA LAVVEQFCRF
LGRVAGNNVL TLGARGGVYI VGGVIPRFAE LFLRSGFAAS FADKGCMSGY FTGVPVWLVT
AEYSGLEGAG VALQQALDH