| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1048 |
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| Symbol | |
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| ID | 5194305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1177896 |
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| End bp | 1179722 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640585506 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001266393 |
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| Protein GI | 148546291 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.205842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCGC GCATCCTTGA GGTCACCCAG CGGCTGGTCG AACGCAGCCG CGCCACCCGC
GAACGCTACC TGCAACTGAT TCGCGGTGCG GCCAGTGAAG GCCCCATGCG TGCCAGCCTG
CAGTGCGCCA ACTTCGCCCA CGGCGTGGCC GGTTGCGGCA GCGAAGACAA GCAGACTCTG
CGCCTGATGA ACGCGGCTAA CGTGGCCATC GTCTCTGCCT ACAACGACAT GTTGTCTGCC
CACCAGCCTT ACTTGCACTT CCCCGAGCAG ATCAAGCAGG CCCTGCGCGA GGTCGGCTCG
GTCGGCCAGT TCGCCGGTGG CGTGCCGGCC ATGTGCGACG GGGTGACCCA GGGCGAGCCG
GGCATGGAGC TGGCGATCGC CAGCCGTGAA GTGATCGCGA TGTCCACGGC GGTAGCGCTG
TCGCACAACA TGTTCGACGC AGCACTCATG CTGGGCATCT GCGACAAGAT CGTCCCCGGG
CTGATGATGG GGGCGCTGCG CTTTGGCCAC CTGCCGACCA TCTTCGTCCC GGGTGGGCCA
ATGGTTTCCG GCATCTCCAA CAAGCAGAAG GCCGATGTGC GCCAGCGCTA TGCCGAAGGC
AAGGCCAGCC GCGAAGAGCT GTTGGAGTCC GAGATGAATT CCTACCACAG CCCCGGCACC
TGCACCTTCT ACGGCACCGC CAACACCAAC CAGTTGGTGA TGGAAGTGAT GGGGCTGCAC
CTGCCGGGCG CCTCGTTCGT CAACCCGTAC ACGCCGCTGC GTGACGCACT CACCGCCGAG
GCTGCGCAGC AGGTGACGCG CATGACCAAG GCCAGCGGCA GCTTCATGCC GCTGGGCGAA
ATCGTCGACG AGAAGGCACT GGTCAATTCC ATCGTCGCGC TGCACGCGAC TGGCGGCTCG
ACCAACCACA CCCTGCACAT CCCGGCGATT GCCCAGGCTG CCGGTATCCA GCTGACCTGG
CAGGACATGG CCGACCTCTC CGAAGTGGTG CCGACCCTGT CGCACGTGTA CCCCAACGGC
AAGGCCGACA TCAACCACTT CCAGGCTGCC GGCGGCATGG CCTTCCTGAT TCGTGAACTG
CTCGACGCCG GCCTGCTGCA CGAAGATGTC AACACCGTGG CCGGCCATGG CCTGCGCCGC
TACACCCAGG AACCCTTCCT CGACAATGGC AAGCTGGTGT GGCGCGAAGG GCCGCAACAC
AGCCTGGACG AAAGTATCCT GCGCCCGGTG TCGCGACCAT TCTCGGCCGA AGGCGGCCTG
CGGGTGATGG AGGGCAACCT GGGCCGTGGC GTGATGAAAG TGTCTGCCGT TGCCCCCGAG
CACCAGGTGG TCGAGGCCCC GGCGCGGGTG TTCCAGGACC AGCAGTCGCT GGCCGACGCG
TTCAAGGCCG GTGAGCTGGA GCGTGACTTT GTCGCGGTGG TGCGCTTCCA GGGCCCGCGT
TGCAATGGCA TGCCGGAACT GCACAAACTC ACCCCGTTCC TCGGTGTATT GCAGGACCGT
GGCTACAAGG TGGCGCTGGT TACCGACGGG CGTATGTCCG GTGCCTCGGG CAAGATCCCC
GCGGCCATCC ACGTTTGCCC GGAGGCTTAC GACGGCGGCC CGCTGGCGCG GGTGCGCGAT
GGTGATATCG TGCGGGTCGA CGGAGTCGAA GGCACGTTGC GGATCATGGT GTCGGCCGAA
GAACTGGCCA GCCGTGAGCT GCCGCCGGCC CCCCAGGGCA ACGACCTGGG GTGTGGGCGC
GAGCTGTTCG GCTTCATGCG CATGGCGTTC AGCCCGGCAG AGCAGGGCGC CAGTGCCTTT
ACCTCGGCCC TGGAGCACCT CAAATGA
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| Protein sequence | MHPRILEVTQ RLVERSRATR ERYLQLIRGA ASEGPMRASL QCANFAHGVA GCGSEDKQTL
RLMNAANVAI VSAYNDMLSA HQPYLHFPEQ IKQALREVGS VGQFAGGVPA MCDGVTQGEP
GMELAIASRE VIAMSTAVAL SHNMFDAALM LGICDKIVPG LMMGALRFGH LPTIFVPGGP
MVSGISNKQK ADVRQRYAEG KASREELLES EMNSYHSPGT CTFYGTANTN QLVMEVMGLH
LPGASFVNPY TPLRDALTAE AAQQVTRMTK ASGSFMPLGE IVDEKALVNS IVALHATGGS
TNHTLHIPAI AQAAGIQLTW QDMADLSEVV PTLSHVYPNG KADINHFQAA GGMAFLIREL
LDAGLLHEDV NTVAGHGLRR YTQEPFLDNG KLVWREGPQH SLDESILRPV SRPFSAEGGL
RVMEGNLGRG VMKVSAVAPE HQVVEAPARV FQDQQSLADA FKAGELERDF VAVVRFQGPR
CNGMPELHKL TPFLGVLQDR GYKVALVTDG RMSGASGKIP AAIHVCPEAY DGGPLARVRD
GDIVRVDGVE GTLRIMVSAE ELASRELPPA PQGNDLGCGR ELFGFMRMAF SPAEQGASAF
TSALEHLK
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