Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1032 |
Symbol | |
ID | 5192139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1158491 |
End bp | 1159132 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640585490 |
Product | hypothetical protein |
Protein accession | YP_001266377 |
Protein GI | 148546275 |
COG category | [S] Function unknown |
COG ID | [COG4944] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.929745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTG ACGATTTGAT CGCCTTGCTG GCCGCAGGCG AAGGGCCAGT ACCGCGCCAC GCCGTTTGCA GGCGGATGGC AGTGGCTGTG CTGGGCGGGC TGACCGCCGC ACTGCTGCTG ACAATTACCC TTTACGGTGT ACGCAGTGAT ATCACAGAGG TCGCACAAAC CCCGTTGTTC TGGGGCAAAG TCGCCTTTCC AACCAGCTTG GCGTTGATCG GGCTGTGGTT GACGAGCCGC TTGGCCAGGC CAGGAGGGAA GGGCGCTGCA GGCTGGAAGA TGCTTGGCTT GCCACTGCTG CTGGTCTGGT GCGGGGCGGC GGTCAGCATC GCCGGGGCGC CTGTGGAGGC GCGCGCCGAA CTGTTGTTCG GGCGCACATG GCGTACCTGC GCACTGAATA TCACGTTGCT GTCGGTGCCG GCCTTTGTCA CCGTGTTCTG GGCGCTGAAA GGTCTGGCGC CCACTCGGTT ACGGCAAGCG GGCGCTGCCG GTGGCCTGCT GGCGGGCTCG ACCGCAACGG TTGCCTACTG CCTGCATTGT CCGGAAATGG GCGTACCGTT CTGGGGTGTG TGGTATGTCC TGGGCATGCT CCTGCCGACG GTATTCGGTG CCTGGTGGGG CCCCCGCATG CTGCGTTGGT AG
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Protein sequence | MKTDDLIALL AAGEGPVPRH AVCRRMAVAV LGGLTAALLL TITLYGVRSD ITEVAQTPLF WGKVAFPTSL ALIGLWLTSR LARPGGKGAA GWKMLGLPLL LVWCGAAVSI AGAPVEARAE LLFGRTWRTC ALNITLLSVP AFVTVFWALK GLAPTRLRQA GAAGGLLAGS TATVAYCLHC PEMGVPFWGV WYVLGMLLPT VFGAWWGPRM LRW
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