| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1031 |
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| Symbol | |
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| ID | 5193395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1157917 |
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| End bp | 1158501 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640585489 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001266376 |
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| Protein GI | 148546274 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.92184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAA CTAACTCACA GGATGAGCTC GAGGCTCGCG AGGCCCGGTT GAAAGCACTG
TTGCTTCGTG GGCTGACAGG CGACCAGCTG GCCTATCAGG ATTTTCTTGG CACGCTTGCG
CTGCATGTAC GTGCGTTTCT GCGCAGCCGT CTGAGCAGGC GCCCGGCCGA GATAGAGGAC
ATGGTGCAGG ATGTGCTGCT GGCGGTGCAT AACGCGCGCC ACACTTACCA GTCGCAGCAG
CCGTTGACCG CCTGGGTGCA GGCGATCGCC CGTTACAAGC TGGCGGATCA TCTGCGAAGT
GTTTCACGTC GCGACGCCCG GCATGATGTG CTGGACGATG ATGCGCAACT GTTTGCCGTC
TCGGAGGTTG AATCAGTCGA GGCCAGCCGA GACCTGACCA AGCTGCTCAA GCAACTGCCA
GAGCGGCAAC GACTGCCGAT TGTTCATGTC AAGCTGGAGG GGTTGTCCGT CGAAGAGACG
GCACAACTTA CCGGGCTTTC CAGTTCAGCG GTAAAGGTGG GGATACATCG AGGTCTGAAA
GCGCTATCCA GGCTGATTGG AGGAGCCAAC AACCATGAAG ACTGA
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| Protein sequence | MQRTNSQDEL EAREARLKAL LLRGLTGDQL AYQDFLGTLA LHVRAFLRSR LSRRPAEIED
MVQDVLLAVH NARHTYQSQQ PLTAWVQAIA RYKLADHLRS VSRRDARHDV LDDDAQLFAV
SEVESVEASR DLTKLLKQLP ERQRLPIVHV KLEGLSVEET AQLTGLSSSA VKVGIHRGLK
ALSRLIGGAN NHED
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