| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1029 |
|---|
| Symbol | |
|---|
| ID | 5192771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1156555 |
|---|
| End bp | 1157388 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640585487 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266374 |
|---|
| Protein GI | 148546272 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3220] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.752115 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAG ACGCACGAAT GGGCGCCGGA ATCAGCCTGA AGGCCGAGTA CTACGACCAG
GCGCTGGCGT GCAATCTCGA AGGGCTCTGG TTTGAGGTTC ACCCGGAGAA CTACATGGTC
GGTGGCCCTC GCCTTGCCTG GCTGAACCGA ATCGCAACAC TTCACCCGGT CTCATTGCAT
GGTGTAGCAC TTTCGCTTGC GGCTGACGCG CCCCCCGATC AGGACCATTT GCAGCGTCTG
CGCGCACTGT GCGATCAGAT CGAACCGGTA CTTGTGTCAG AGCACCTGGC CTGGTCCACC
TGGCAGGGGC ACTACCATCC AGACCTGCTG CCATTTCCCC GCAGCAACGA AGCCCTGCAG
CGCATCGCTG AAAACATCCA GCGATGCCAG GAGGTATTGG GCCGGCGTAT ATCCATCGAA
AACCCCAGTC ATTACTTGCA GCTGCAGGGC CATGACTGGG ACGAGATCGA CTTTCTTGAC
GAACTGACAC GTCGCACCGG TTGTGGCCTG CTGCTGGACA TCAACAACGT CTATGTGAGT
GCTCACAATC TGGGGTTTTC GGCAACTGCC TACCTGGACC GCTTTCCAGC GCAAGCCATC
ACAGAAGTTC ATCTGGCCGG GCACAGCGAT GATGACCAAG GCAGCCTGTT GATCGACTCT
CATGATGCGC TGGTGGCCGA GCCTGTGTGG GCGCTGTACC GCCAACTGGT TTCCCGTGTC
GGCCCGCGCC CGACACTCAT TGAACGTGAC GACAAGCTTC CCCCGTTCAC CGAGCTGCTT
GCTGAACGGT CCATCGCACA GTCGATCATG TCTTGCCCAG GTGTATTGCC ATGA
|
|---|
| Protein sequence | MNADARMGAG ISLKAEYYDQ ALACNLEGLW FEVHPENYMV GGPRLAWLNR IATLHPVSLH
GVALSLAADA PPDQDHLQRL RALCDQIEPV LVSEHLAWST WQGHYHPDLL PFPRSNEALQ
RIAENIQRCQ EVLGRRISIE NPSHYLQLQG HDWDEIDFLD ELTRRTGCGL LLDINNVYVS
AHNLGFSATA YLDRFPAQAI TEVHLAGHSD DDQGSLLIDS HDALVAEPVW ALYRQLVSRV
GPRPTLIERD DKLPPFTELL AERSIAQSIM SCPGVLP
|
|---|
| |