| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1023 |
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| Symbol | |
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| ID | 5194672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1149137 |
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| End bp | 1150258 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585481 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_001266368 |
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| Protein GI | 148546266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAA CACTGCTCAA GACCCCACTG CATGCCTTGC ACCTGGAACT GGGTGCACGC
ATGGTGCCGT TCGCCGGCTA CGACATGCCG GTGCAGTACC CGCTGGGCGT GCTCAAGGAA
CACCTGCACA CCCGCGAGCA GGCCGGCCTG TTCGACGTCT CGCACATGGG CCAGATCGTT
CTGCGTGGCG CTGACGCCGC CAAGGCGCTG GAAAGCCTGG TACCGGTGGA CATCATCGAC
CTGCCGGTGG GCATGCAGCG TTATGCCATG TTCACCAATG AGCAAGGCGG CATTCTCGAC
GACCTGATGG TGGCCAACCT GGGCGAGGAC ACCCTGTTCC TGGTAGTCAA CGCCGCCTGC
AAGGAGCAGG ACCTGGCTCA CCTGCAATCC CACATTGGCA ACCGTTGCGA GGTGCAGCCG
CTGTTCGAGG AGCGTGCCCT GCTCGCCCTG CAAGGCCCGG CTGCAGTCAA GGTGCTGGAA
CGCCTGGCTC CAGAAGTGGC CGGCATGACC TTCATGCAGT TCCGCCGAGT AACACTGCTG
GGTGTGGACT GCTTCGTCAG CCGCTCGGGC TACACCGGCG AAGACGGCTA CGAGATCTCG
GTACCGGTCA ACGCTGCCGA CGCCCTGGCT CGCCGCCTGC TGGCCGAGCC GGAAGTACAG
CCGATCGGCT TGGGCGCACG CGACTCGCTG CGCCTGGAAG CTGGCCTGTG CCTGTATGGC
CACGACATGA ACAGCGAGAC TACGCCGATC GAAGCCAGCC TGCTGTGGGC AATTTCCAAG
GTGCGCCGTG CCGAGGGTGC ACGGGCTGCC AGCTTCCCGG GTGCCGAGAC GATCTTCGCC
CACGTGCGCG ATGGTGTTGC GCGCAAACGT GTCGGCCTGT TGCCGCAGGA GCGTACGCCT
GTTCGTGAAG GTGCGGACAT TGTCGACGCA AACGATAAAC CGGTAGGCAA AGTGTGCAGC
GGGGGCTTTG GCCCGACACT CGCCGCACCT GTCGCCATGG GTTATATCGA TAGTGAACAT
GCAGCACTCG ACACCGCACT GTTTGCCGTG GTGCGTGGAA AGAAGGTGGC CTTGAAAGTC
AGCAAAATGC CTTTCGTGAC ACCACGTTAC TACCGTGGCT GA
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| Protein sequence | MSETLLKTPL HALHLELGAR MVPFAGYDMP VQYPLGVLKE HLHTREQAGL FDVSHMGQIV
LRGADAAKAL ESLVPVDIID LPVGMQRYAM FTNEQGGILD DLMVANLGED TLFLVVNAAC
KEQDLAHLQS HIGNRCEVQP LFEERALLAL QGPAAVKVLE RLAPEVAGMT FMQFRRVTLL
GVDCFVSRSG YTGEDGYEIS VPVNAADALA RRLLAEPEVQ PIGLGARDSL RLEAGLCLYG
HDMNSETTPI EASLLWAISK VRRAEGARAA SFPGAETIFA HVRDGVARKR VGLLPQERTP
VREGADIVDA NDKPVGKVCS GGFGPTLAAP VAMGYIDSEH AALDTALFAV VRGKKVALKV
SKMPFVTPRY YRG
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