| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1015 |
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| Symbol | valS |
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| ID | 5194903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1139983 |
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| End bp | 1142829 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585473 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001266360 |
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| Protein GI | 148546258 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA CCTACCAGCC GCACGCAATC GAAACTTCCT GGTACAACAC CTGGGAGTCC
GAGAACTATT TCGCTCCACA AGGTGCAGGC GAGTCCTACA CCATCATGAT CCCGCCGCCG
AACGTAACCG GCAGCCTGCA CATGGGCCAC GGGTTCAACA ACGCGATCAT GGACGCCCTG
ATCCGTTTCC GCCGCATGCA AGGCCGCGAC ACCCTGTGGC AGCCGGGTAC CGATCACGCG
GGTATCGCCA CGCAGATGCT GGTCGAGCGC CAACTTGAAG CCAAAGGCCA GAACCGTCAT
GACCTGGGCC GCGAAAAGTT CCTGGAAAAA GTCTGGGAAT GGAAGGATCA GTCCGGCGGC
AACATCAGCC GCCAGATTCG CCGCCTGGGC TCATCGGTAG ACTGGAGCCG CGAGCGCTTC
ACCATGGACG ACGGCCTCTC CGAAGCGGTT AAAGAAGCGT TCGTGCGCCT GCATGAAGAC
GGCCTTATCT ACCGCGGCAA GCGCCTGGTC AACTGGGACA CCAAGCTGCA CACGGCCATC
TCCGACCTCG AAGTGGAAAA CCACGACGAG AAAGGCCACC TGTGGAACCT GCGCTACCCA
CTGGCCGACG GCGCCAAGAC TGCCGAAGGC CAGGACTACC TGGTAGTTGC CACCACGCGT
CCGGAAACCC TGCTGGGTGA CGCTGCCGTA GCAGTCAACC CGAACGACGA ACGCTACCAG
GCATTGATCG GCAAATTCGT CGAACTGCCA TTGGTCGGCC GCCGCATCCC GATCATCGCC
GATGACTACT GCGACCCCGA GTTCGGTACC GGTTGCGTGA AGATCACCCC GGCCCACGAC
TTCAACGACT ACGAAGTCGG CAAGCGCCAC AACCTGCCAC TGCTGAACAT CTTCGACAAG
AACGCCTTCG TGCTGGCCAG CGCCCAGGCC TTCAACCTCG ACGGCAGCGT TAACGAGCAG
GTCGACACCC AATTGCCGGC CCAGTACGCC AACCTTGACC GCTTTGTCGC GCGCAAGCAG
ATCGTCGCCG ACCTGGACGC CCAGGGCCTG CTGGTCAGCA TCGACGACCA CGCCCTGAAA
GTGCCGAAAG GCGACCGTTC CGGCACGGTC ATCGAGCCGT GGCTGACCGA CCAGTGGTAC
GTTTCCACCA AGCCGCTGGC AGAGCCTGCC ATCGCCGCCG TGGAAGATGG CCGCATCCAG
TTCGTGCCCA AGCAATACGA GAACATGTAC TTCTCCTGGA TGCGCGATAT CCAGGACTGG
TGCATCAGCC GCCAACTGTG GTGGGGCCAC CGCATTCCTG CGTGGTACGA CGAGGCCGGC
CAGGTCTACG TTGGCCGCAA CGAGGAAGAA GTGCGCGCCA AGCACAAGCT GGGCGCCGAC
GTGGTCCTGC GTCAGGATGA CGACGTACTC GACACCTGGT TCAGCTCGGG CCTGTGGACA
TTCTCCACCC TGGGCTGGCC GGAACAGACC GAATTCCTCA AGAAGTTCCA CTCCACCGAC
GTGCTGGTGA CTGGCTTCGA CATCATCTTC TTCTGGGTTG CGCGCATGAT CATGCTGACC
ATGCACCTGA TCAAGAACGA AGACGGCACC CCGCAGGTAC CGTTCAAGAC CGTGTACGTG
CACGGCCTGG TACGTGACGG CCAGGGCCAG AAGATGTCCA AGTCCAAGGG CAACGTGCTG
GACCCGCTGG ACATCGTCGA CGGCATCACC CTCGACGCCC TGCTGGAAAA ACGCACCAGC
GGCATGATGC AGCCCAAGCT TGCCGAGAAG ATCGCCAAGC AGACCAAGGC CGAGTTCCCC
GAAGGTATTG CCAGCTACGG CACCGACGCC CTGCGCTTCA CCTTCTGCTC GCTGGCCTCG
ACAGGCCGCG ACATCAAGTT CGACATGGGC CGCGTCGAAG GCTACCGCAA CTTCTGCAAC
AAGATCTGGA ACGCTGCCCG CTACGTGCTG GACAAGGGTG AAGACTGCGG CCAGAACGGC
GAAGCCTACG AGCTGTCGCT GGCAGACCGC TGGATCATCT CGCAACTTCA GCGTACCGAA
GCCGAAGTAA CCCGCCAGCT GGAGCAGTTC CGCTTCGACC TGGCCAGCCA GGCGCTGTAC
GAGTTCATCT GGAACCAGTA CTGCGACTGG TACCTGGAGC TGTCCAAACC GGTACTGTGG
GACGAAAACG CCCCGGTAGA GCGCGCCCGT GGCACCCGCC GCACCTTGGT GCGCGTGCTG
GAAGTGGCAC TGCGTCTTGC GCATCCGTTC ATGCCGTTCA TCACCGAAGA AATCTGGCAG
CGCATTGCGC CGCTGGCCGG CATCGACGGC AAGACCATCA TGCTGCAGCC ATGGCCAGTG
GCCAACGAAG CGCGCATTGA CGCCGCCGCC GAAGGCGACA TCGAGTGGCT GAAAGAGTTG
ATGGTCGGCC TGCGTAATAT TCGCGCCGAA ATGAACATCG GCCCCGGCAA GCCGCTGCCG
CTGTTCCTGA AGAACGCCAA CGCCGACGAC CAGCGCCGCC TGCAGGAAAA CGAAGCGCTG
CTGAAGAAGC TGGCCAAGGT CGAGTCGTTC ACCGTACTGG GTGATGCCGA CGAAGCGCCG
CTGTCCGCTA CCGCCCTGGT CGGTGACCTG CAAGTGCTGG TGCCAATGGC CGGGCTGATC
GACAAGGATG CCGAGCTGGC GCGCCTGAAC AAGGAAATCC AGCGTCTGCA AGGTGAAGTG
CAACGTGTTG GCGGCAAGCT GTCCAACGCA GCCTTCGTCG ACAAGGCCCC GCCTGCGGTG
ATCGAGAAGG AACGCGCCAA GCTGGCCGAG TCCGAACAGG CCCTGGCCAA CTTCACCGAG
CAGCATGCGC GGATTGCAGC GCTGTAA
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| Protein sequence | MDKTYQPHAI ETSWYNTWES ENYFAPQGAG ESYTIMIPPP NVTGSLHMGH GFNNAIMDAL
IRFRRMQGRD TLWQPGTDHA GIATQMLVER QLEAKGQNRH DLGREKFLEK VWEWKDQSGG
NISRQIRRLG SSVDWSRERF TMDDGLSEAV KEAFVRLHED GLIYRGKRLV NWDTKLHTAI
SDLEVENHDE KGHLWNLRYP LADGAKTAEG QDYLVVATTR PETLLGDAAV AVNPNDERYQ
ALIGKFVELP LVGRRIPIIA DDYCDPEFGT GCVKITPAHD FNDYEVGKRH NLPLLNIFDK
NAFVLASAQA FNLDGSVNEQ VDTQLPAQYA NLDRFVARKQ IVADLDAQGL LVSIDDHALK
VPKGDRSGTV IEPWLTDQWY VSTKPLAEPA IAAVEDGRIQ FVPKQYENMY FSWMRDIQDW
CISRQLWWGH RIPAWYDEAG QVYVGRNEEE VRAKHKLGAD VVLRQDDDVL DTWFSSGLWT
FSTLGWPEQT EFLKKFHSTD VLVTGFDIIF FWVARMIMLT MHLIKNEDGT PQVPFKTVYV
HGLVRDGQGQ KMSKSKGNVL DPLDIVDGIT LDALLEKRTS GMMQPKLAEK IAKQTKAEFP
EGIASYGTDA LRFTFCSLAS TGRDIKFDMG RVEGYRNFCN KIWNAARYVL DKGEDCGQNG
EAYELSLADR WIISQLQRTE AEVTRQLEQF RFDLASQALY EFIWNQYCDW YLELSKPVLW
DENAPVERAR GTRRTLVRVL EVALRLAHPF MPFITEEIWQ RIAPLAGIDG KTIMLQPWPV
ANEARIDAAA EGDIEWLKEL MVGLRNIRAE MNIGPGKPLP LFLKNANADD QRRLQENEAL
LKKLAKVESF TVLGDADEAP LSATALVGDL QVLVPMAGLI DKDAELARLN KEIQRLQGEV
QRVGGKLSNA AFVDKAPPAV IEKERAKLAE SEQALANFTE QHARIAAL
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