Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1001 |
Symbol | |
ID | 5194809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1127160 |
End bp | 1127441 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640585459 |
Product | hypothetical protein |
Protein accession | YP_001266346 |
Protein GI | 148546244 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAGC CGGGCGTGCT GCGTCTGGCT GGCGTGCTGG ATTACCGCAG CGGCCCGGCC TTGCGCAAGC AAGGCAAGGT GCTGATCGAT GGCTCGCGCG AGCCGCGACT GGTGCTTGAT TGCTCGGCTG TCGAGAAGTC GTCGAGTGTC GGCTTGTCGT TATTGCTTGC GTACATGCGT GATGCTCAGG CCACTGGCAA GGCGTGCGAA GTGCGTGGCA TGCCTGACGA CATGCGGGAA ATTGCCGAGG TCTATGATCT CGATGAAGTG CTGGCAAGCT AG
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Protein sequence | MAEPGVLRLA GVLDYRSGPA LRKQGKVLID GSREPRLVLD CSAVEKSSSV GLSLLLAYMR DAQATGKACE VRGMPDDMRE IAEVYDLDEV LAS
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