Gene Pput_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1001 
Symbol 
ID5194809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1127160 
End bp1127441 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content61% 
IMG OID640585459 
Producthypothetical protein 
Protein accessionYP_001266346 
Protein GI148546244 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGC CGGGCGTGCT GCGTCTGGCT GGCGTGCTGG ATTACCGCAG CGGCCCGGCC 
TTGCGCAAGC AAGGCAAGGT GCTGATCGAT GGCTCGCGCG AGCCGCGACT GGTGCTTGAT
TGCTCGGCTG TCGAGAAGTC GTCGAGTGTC GGCTTGTCGT TATTGCTTGC GTACATGCGT
GATGCTCAGG CCACTGGCAA GGCGTGCGAA GTGCGTGGCA TGCCTGACGA CATGCGGGAA
ATTGCCGAGG TCTATGATCT CGATGAAGTG CTGGCAAGCT AG
 
Protein sequence
MAEPGVLRLA GVLDYRSGPA LRKQGKVLID GSREPRLVLD CSAVEKSSSV GLSLLLAYMR 
DAQATGKACE VRGMPDDMRE IAEVYDLDEV LAS