Gene Pput_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0994 
Symbol 
ID5190353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1122056 
End bp1122628 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content57% 
IMG OID640585452 
Producthypothetical protein 
Protein accessionYP_001266339 
Protein GI148546237 
COG category[S] Function unknown 
COG ID[COG3117] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCA AGAAAGCCCG AAACATTGTG CTGCTGGGGG CGATAGCCGC CCTGTTGGTA 
GCCATTGGCT ACTGGAATGT CAGCCCGGAA AGCTTCCTCG ACAAGCCCGT GGCCCAAGTC
GACGAAAGCG CCATCGATTA CTACGCGATC AACGCCCACA GCGTGCAGTT CTTGCCCGAC
GGCAAGCTGC AATACGAAAT GACCGCCGAC AGGATCGAAC ACCTCAAGAC CAGCGAAGTC
ACCCAGGTGA CCACACCGGA CCTGCACCTG TACCGCGGCA CCGAGTACCC GTGGCATGTG
CAGAGCACGC GCGCCGAGGT CAATCCTGAC GGTACCGAGG TCGAACTGAT CGACAAGGTA
CGGATTGCCC GCACCGATGA AAAGCAGCGT GAAACCATCA TTACCAGCTC ACGCATGACC
GTGTTCCCGC AGAAGCAATA TGCGCAGACC GAGCAAGCCG TTAGAATCGA CGGCGCCGGA
GGCACAACTA CGGGCAAAGG CATGAAAGCG TATTTGAAAG AAGGCAAGAT GGACTTGCTC
TCTAACGTAA GAGGACAGTA TGAGGCTCGT TAA
 
Protein sequence
MLSKKARNIV LLGAIAALLV AIGYWNVSPE SFLDKPVAQV DESAIDYYAI NAHSVQFLPD 
GKLQYEMTAD RIEHLKTSEV TQVTTPDLHL YRGTEYPWHV QSTRAEVNPD GTEVELIDKV
RIARTDEKQR ETIITSSRMT VFPQKQYAQT EQAVRIDGAG GTTTGKGMKA YLKEGKMDLL
SNVRGQYEAR