Gene Pput_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0988 
Symbol 
ID5193362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1117428 
End bp1118282 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content60% 
IMG OID640585446 
Producthypothetical protein 
Protein accessionYP_001266333 
Protein GI148546231 
COG category[R] General function prediction only 
COG ID[COG1660] Predicted P-loop-containing kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA TCATCGTCAG CGGCCGGTCC GGCTCCGGCA AGAGCACCGC CCTCGATGTC 
CTGGAAGACA GCGGTTTCTA TTGCATCGAC AATCTGCCAG CCGGGCTATT GCCGCAGTTG
GCGGAAAATG CACTGATCAA CACCGAATTG CTGCAGCCCA AGGTGGCGGT TTCGATCGAC
GCACGCAACC TGCCCAGCCA CCTGATGCGT TTTCCCGAGC TGCTTGAAGA AGCCCGCGCA
CGGCACATCC AGTGCGACGT GTTGTACCTG GATGCCGATG AAGAGGTCCT TCTCAAGCGC
TTCTCGGAAA CCCGCAGGCG GCACCCCCTG ACCAACGCCA ACCGCTCGCT CGCGGAAGCG
ATCCGCGTGG AAAGCGATTT GTTGGGCCCC ATTGCCGACC TGGCCGACCT GAAGATCGAC
ACCACCAACC TGAACCTGTA CCAGTTGCGT GACTCGATCA AACTGCGTCT GCTCAACCAA
CCCGAGCCTG GCACAGCGTT TCTGGTCGAG TCGTTCGGGT TCAAACGGGG CATGCCGGTC
GACGCCGACC TGGTTTTTGA CGTGCGCTGC CTGCCCAACC CCTACTGGAA ACCAGAACTG
CGTGAGCACT CAGGTCTCGA TCAACCCGTG ATCGACTACC TGGCCGCACA ACCGGATGTC
GAAGACATGT ACAACGACAT CTCCAGCTAC CTGCTCAAAT GGTTGCCCCG CTTCGCTGCC
AGCAACCGCG CCTACGTAAC CATTGCCATC GGCTGCACTG GCGGCCATCA CCGTTCGGTG
TACATCACCG AGCGCCTTGG TCAACAGCTG CAGCAAACCC TGAAAAACGT CCAGGTCCGT
CATCGCGACC TCTAG
 
Protein sequence
MRLIIVSGRS GSGKSTALDV LEDSGFYCID NLPAGLLPQL AENALINTEL LQPKVAVSID 
ARNLPSHLMR FPELLEEARA RHIQCDVLYL DADEEVLLKR FSETRRRHPL TNANRSLAEA
IRVESDLLGP IADLADLKID TTNLNLYQLR DSIKLRLLNQ PEPGTAFLVE SFGFKRGMPV
DADLVFDVRC LPNPYWKPEL REHSGLDQPV IDYLAAQPDV EDMYNDISSY LLKWLPRFAA
SNRAYVTIAI GCTGGHHRSV YITERLGQQL QQTLKNVQVR HRDL