Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0985 |
Symbol | |
ID | 5190394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1115479 |
End bp | 1116204 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640585443 |
Product | superoxide dismutase |
Protein accession | YP_001266330 |
Protein GI | 148546228 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGTA CCCGCGTACC GAGCGCTTGC TCAACCGCCA CAGCGCCGGG GCCAGCGAGC TCGCTGCCCA GCCGGATGTG GCACCCAGAA CCCATGCCTA CGGAATTCAC TGACATGCCC CATACCTTGC CTGCATTGCC ATACGCCTAC GATGCGCTGG AACCCCACAT TGATGCCCAG ACAATGGAAA TCCACCACAC CAAGCATCAC CAGACCTACG TGAACGGCCT CAATGCCGCC CTCGAAGGTA CCGAGTGGGC CGAATGGCCG GTGGAAAAAC TGGTCGCTGC CGTCAAGCAA CTGCCGGAGA ACCTGCGTGG CGCTGTGACC AACCACGGCG GCGGTCACGC CAACCACAGC CTGTTCTGGA CTGTCATGTC ACCTCAGGGC GGTGGCGAGC CTGTGGGCCA GCTGGCGCAA GCCGTCACAG CACAACTTGG CGGCTTCGAG GCTTTCAAGG AGGCTTTCAC CAAAGCCGCG TTGACCCGCT TCGGCAGCGG TTGGGCGTGG CTCAGCGTCA CGCCGCAAAA AACGTTGGTG GTGGAGAGTA GCGGCAACCA GGACAGCCCG CTGATGCACG GCAATGCGCC GATCCTGGGC CTGGACGTGT GGGAGCACGC TTACTACCTC AAGTACCAGA ACCGTCGTCC GGAATACATC GGTGCCTTCT ACAACGTCAT TGACTGGGTG GAAGTTGAAC GTCGTTACCT TGAAGCCCTG AAGTGA
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Protein sequence | MASTRVPSAC STATAPGPAS SLPSRMWHPE PMPTEFTDMP HTLPALPYAY DALEPHIDAQ TMEIHHTKHH QTYVNGLNAA LEGTEWAEWP VEKLVAAVKQ LPENLRGAVT NHGGGHANHS LFWTVMSPQG GGEPVGQLAQ AVTAQLGGFE AFKEAFTKAA LTRFGSGWAW LSVTPQKTLV VESSGNQDSP LMHGNAPILG LDVWEHAYYL KYQNRRPEYI GAFYNVIDWV EVERRYLEAL K
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