Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0984 |
Symbol | fumC |
ID | 5190393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1113723 |
End bp | 1115102 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585442 |
Product | fumarate hydratase |
Protein accession | YP_001266329 |
Protein GI | 148546227 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGTG ATACCCGTAT CGAGCGTGAC AGCATGGGTG AGCTGCAGGT GCCGGCCCAG GCCCTCTACG GCGCCCAGAC CCAGCGCGCG GTCGACAACT TCCCGATCAG CGGCCAACGT ATGCCGGCCC AGTTCATTCG TGCCTTGTTG TTGGCCAAGG CCGCTGCGGC CAAGGCCAAC GTCGAACTGG AGCAACTGTC TGCCGGGCGG GGCCAGGCTA TCGTCAAGGC TGTCGAGCAA TTGCTGGCCG AGGACTTCAT CCAGCACTTC CCGGTGGATG TGTTCCAGAC AGGCTCTGGC ACCAGTTCGA ACATGAACGC CAATGAGGTG ATCGCCACCT TGGCTACCCA TGTACTGGGT GAGGCGGTCA ACGCCAATGA CCACGTCAAC TGTGGCCAGA GCAGCAATGA CATCATTCCG ACCACCATCC ACGTCAGCGC CGCGCTGGCC CTGCACGAGC AGTTGCTGCC AGCCCTGGCG CACCTGGTAC AGGTGATCGA GGTCAAGTCG GCACAAGTAC ATCAATTCGT GAAGACCGGT CGTACTCACC TGATGGACGC GATGCCCGTG CGTATGAGTC AGGTGCTGGA TGGCTGGGCA GCGCAAATCA ATGCTGCCAA GGCGCACATC GAAGGTGTGC TGCCGCGCTT GCAGGCGCTG GCCCAGGGCG GAACCGCCGT GGGTACCGGC ATCAATGCCC ATCCGCAGTT CGCTGTCGGT TTCGCTCGCC AGCTCAGTGG CCTGACCAAG ATCGAGTTCA CGCCCGGCCA GAACCTGTTC GCACTGATCG GCTCGCAGGA CACTGCCGTG GCTTTGTCTG GCCAGCTCAA GACCACCGCG GTGGCGTTGA TGAAAATCGC CAACGATCTG CGCTGGATGA ACTCCGGCCC GCTGGCCGGT CTGGGCGAAA TCGAGCTGCA AGCTCTGCAG CCGGGCTCTT CGATCATGCC TGGCAAGGTC AACCCGGTGA TCCCGGAGGC CACTGCCATG GTCGCCGCCC AAGTGATTGG CAACGACGCG ACCATCGCCG TCGCAGGCCA AGCCGGTAAC TTCGAGCTGA ACGTGATGCT GCCGGTGATC GCCCGCAACC TGCTGGAAAG CATCGAGCTG ATGGCCAATG TCAGCCGCTT GCTGGCCGAC AAAGCCATCG CCAGCTTCAA GGTCAACGAA GACAAACTCA AGGAAGCGCT CGCGCGCAAC CCGATTCTGG TCACGGCGTT GAATCCGATC ATCGGCTACC TCAAGGCCGC CGAAATCGCC AAGACCGCCT ACAAGCAGGG TCGTCCAATC ATCGATGTGG CGCTGGAGCA CACCGACCTG TCCCGCGACC AGCTTGAAGC GCTGCTGGAC CCGGAAAAAC TCACCGCCGG CGGTATCTGA
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Protein sequence | MMSDTRIERD SMGELQVPAQ ALYGAQTQRA VDNFPISGQR MPAQFIRALL LAKAAAAKAN VELEQLSAGR GQAIVKAVEQ LLAEDFIQHF PVDVFQTGSG TSSNMNANEV IATLATHVLG EAVNANDHVN CGQSSNDIIP TTIHVSAALA LHEQLLPALA HLVQVIEVKS AQVHQFVKTG RTHLMDAMPV RMSQVLDGWA AQINAAKAHI EGVLPRLQAL AQGGTAVGTG INAHPQFAVG FARQLSGLTK IEFTPGQNLF ALIGSQDTAV ALSGQLKTTA VALMKIANDL RWMNSGPLAG LGEIELQALQ PGSSIMPGKV NPVIPEATAM VAAQVIGNDA TIAVAGQAGN FELNVMLPVI ARNLLESIEL MANVSRLLAD KAIASFKVNE DKLKEALARN PILVTALNPI IGYLKAAEIA KTAYKQGRPI IDVALEHTDL SRDQLEALLD PEKLTAGGI
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