| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0982 |
|---|
| Symbol | |
|---|
| ID | 5193616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1111740 |
|---|
| End bp | 1113086 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640585440 |
|---|
| Product | peptidase U62, modulator of DNA gyrase |
|---|
| Protein accession | YP_001266327 |
|---|
| Protein GI | 148546225 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAG TCCAGAGCGT AGGTCCGAAA GACCTGCCAG CATTGCAGGA ACAGGTTGAG
GCGATCATCG CCGAGGCGCG TCGGCAGGGG GCCAGTGCCT GCGAAGTGGC GGTGTCGCTG
GAGCAAGGGC TGTCCACCAC CGTGCGCCAG CGTGAGGTCG AAACGGTCGA GTTCAACCGC
GACCAAGGCT TTGGTATCAC CCTTTATGTT GGCCAGCGCA AAGGTTCGGC CAGCACCTCG
GCCAGTGGAC CGGAGGCGAT TCGCGAGACC GTCGCCGCAG CGTTGGCAAT TGCCAGGCAT
ACCTCCGAGG ATGAATGCTC GGGCTTGGCC GACGCTGCGC TGATGGCGCG TGAAATCCCG
GATCTGGACC TGTACCACGA CTGGGATATC GAGCCCGAGA AGGCCATCGA AATGGCCCTG
GCCTGCGAGG CAGCGGCGTT CGACGCCGAC CCGCGCATCC TCAACGCCGA TGGCACCACC
CTCAATACCC ACCAAGGCTG CCGCGTGTAT GGCAACAGCC ATGGATTCAT CGGTGGTTAC
GCCTCGACCC GGCACAGCCT GAGCTGCGTG ATGATTGCCG AAGGCGACGG GCAGATGCAG
CGTGACTACT GGTACGACGT GAACCGCCAG GGCAACCTGC TGGCCGACCC GAGCAGCATC
GGCATGCGCG CTGCCCAGCG TGCCGCTAGC CGCCTTGGCG CCCGACCGGT GCCGACTTGC
GAGGTACCGG TGCTGTTCTC GGCCGAATTG GCCGGTGGCC TGTTCGGCAG CTTCCTGTCG
GCTATTTCCG GCGGCAACCT GTACCGCAAG TCGTCGTTCC TGGAGGGTAC CATTGGCCAG
CGCCTGTTCC CTTCCTGGCT GACCCTCGAC GAACGCCCGC ATATTCCGCG CGCGTTGGGC
AGCGCCGCCT TCGACGGTGA TGGCCTGGCC ACCTATGCCA AACCGTTTGT CGACAAAGGC
GAGCTGGTGT CGTACTTGCT GGGTACCTAT TCGGGGCGCA AGCTGGGTTT GCCGAGTACG
GCCAATTCGG GTGGTGTGCA CAACCTGTTC GTCAGCCACG GTGTCGAAGA TCAGGCCGCG
CTGATTCGCC GCATGGGGCG CGGGCTGCTG GTGACCGAAC TGATGGGGCA TGGCTTGAAC
ATGGTGACGG GGGACTATTC CCGTGGTGCG GCGGGGTTCT GGGTCGAGAA TGGCGAGATT
CAGCATGCCG TACAGGAAGT CACCATCGCC GGAAACATGA AGGACATGTT CCAACAGATT
GTCGCGATTG GCAGCGATCT TGAAACCCGT AGCAATATTC ATACGGGCTC GGTGTTGATC
GAGCGGATGA CCGTTGCTGG TAGCTGA
|
|---|
| Protein sequence | MSAVQSVGPK DLPALQEQVE AIIAEARRQG ASACEVAVSL EQGLSTTVRQ REVETVEFNR
DQGFGITLYV GQRKGSASTS ASGPEAIRET VAAALAIARH TSEDECSGLA DAALMAREIP
DLDLYHDWDI EPEKAIEMAL ACEAAAFDAD PRILNADGTT LNTHQGCRVY GNSHGFIGGY
ASTRHSLSCV MIAEGDGQMQ RDYWYDVNRQ GNLLADPSSI GMRAAQRAAS RLGARPVPTC
EVPVLFSAEL AGGLFGSFLS AISGGNLYRK SSFLEGTIGQ RLFPSWLTLD ERPHIPRALG
SAAFDGDGLA TYAKPFVDKG ELVSYLLGTY SGRKLGLPST ANSGGVHNLF VSHGVEDQAA
LIRRMGRGLL VTELMGHGLN MVTGDYSRGA AGFWVENGEI QHAVQEVTIA GNMKDMFQQI
VAIGSDLETR SNIHTGSVLI ERMTVAGS
|
|---|
| |