| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0977 |
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| Symbol | |
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| ID | 5193928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1103388 |
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| End bp | 1104845 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585435 |
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| Product | ribonuclease |
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| Protein accession | YP_001266322 |
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| Protein GI | 148546220 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG AGATCCTGAT CAACATCACC CCGATGGAGT CACGTGTGGC GGTGGTGGAA
AACGGGGTGC TGCAGGAAGT GCATGTCGAG CGCACCCAGC GCCGTGGCAT CGTCGGCAAT
ATCTACAAGG GCAAGGTGGT GCGTGTGCTG CCAGGCATGC AGGCGGCCTT CGTCGACATC
GGCCTCGAGC GCGCAGCGTT TATCCATGCC TCGGAAATCT CCCAGCGCGA AGGCTCGGCG
GTAGAGAACA TCACCGCACT GGTACATGAA GGCCAGGCCC TGGTGGTGCA GGTGACCAAG
GACCCGATCG GCACCAAGGG GGCGCGCCTG ACCACCCAGC TATCGATCCC GTCGCGCTAC
CTGGTGTACA TGCCACGCAG CAGTCATGTT GGTATTTCGC TGAAAATCGA GGACGAGGCC
GAGCGTGAGC GCCTCAAGCA AGTGGTCAGC GACTGCATGG ACAGCGAGAA CATCAAGGAT
GCCGGCGGCT TCATCTTGCG CACCGCCGCC GAAGGCGCGC GTGCCGAGGA GATCTTGCAG
GACATCCGTT ACCTGCGCCG CCTGTGGGAG CAGATCGGCA CCCAGATCAA GACCTGCGGC
GCGCCCACGG TCATTTACGA AGACCTTGGT CTGGCCCTGC GTACCCTGCG CGACCTGGTC
AATCCGAAGA TCGAGAAGAT CCGCATCGAC TCGCGGGAAA CCTTCCAGAA GACCACGCAG
TTCGTTGGCG AGTTGATGCC GGAAATTGCC GACCGCCTCG AACATTACCC CGGCGAGCGC
CCAATCTTTG ACCTGTACGG TGTCGAAGAC GAGATTCAGC GGGCTCTGGA GCGCAAGGTG
CCGTTGAAGT CCGGCGGTTA CCTGGTGGTC GACCCGGCCG AAGCGATGAC CACCATCGAC
GTCAACACCG GGGCTTTCGT CGGCCATCGC AACCTCGAAG AAACCATCTT CAAGACCAAT
CTCGAGGCCG CTACCGCCAT CGCCCGGCAA CTGCGCCTGC GCAACATTGG CGGCATCATC
ATCATCGACT TCATCGACAT GGAAGACGAA GATCACCAGC GTCAGGTACT GCGTACCCTG
GAAAAACAGC TGGAGCGCGA TCACGCCAAG ACCAACATCA TCGGCATCAC CGAGTTGGGC
CTGGTGCAGA TGACCCGCAA GCGTACGCGG GAAAGCCTGG AACAGGTGCT TTGCGAGCCG
TGTCTGGCCT GTCAGGGCCG CGGCAAGCTG AAAACACCCG AGACCATCTG TTACGAAATA
TTCCGCGAGA TCCTGCGTGA GGCCCGTGCC TATCAGGCTG AAGGCTACCG TGTGCTGGCC
AACCAGAAGG TTGTCGACCG CCTGCTGGAT GAAGAGTCAG GCAACGTGGC GGAACTGGAA
GCCTTTATCG GTCGAACCAT TCGCTTCCAG GTCGAGTCGA TGTATTCGCA GGAACAATAC
GACGTGGTGC TGCTCTGA
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| Protein sequence | MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQRRGIVGN IYKGKVVRVL PGMQAAFVDI
GLERAAFIHA SEISQREGSA VENITALVHE GQALVVQVTK DPIGTKGARL TTQLSIPSRY
LVYMPRSSHV GISLKIEDEA ERERLKQVVS DCMDSENIKD AGGFILRTAA EGARAEEILQ
DIRYLRRLWE QIGTQIKTCG APTVIYEDLG LALRTLRDLV NPKIEKIRID SRETFQKTTQ
FVGELMPEIA DRLEHYPGER PIFDLYGVED EIQRALERKV PLKSGGYLVV DPAEAMTTID
VNTGAFVGHR NLEETIFKTN LEAATAIARQ LRLRNIGGII IIDFIDMEDE DHQRQVLRTL
EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLEQVLCEP CLACQGRGKL KTPETICYEI
FREILREARA YQAEGYRVLA NQKVVDRLLD EESGNVAELE AFIGRTIRFQ VESMYSQEQY
DVVLL
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