Gene Pput_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0971 
SymbolgatA 
ID5192698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1097987 
End bp1099438 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content65% 
IMG OID640585429 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001266316 
Protein GI148546214 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.494174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.272239 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAAT TGACCCTGGC CGAGATCGCC CGCGGACTCG CCGACAAATC GTTTTCTTCC 
GAAGAGCTGA CCGGCGCCCT GCTGGCGCGC ATCAAACAGC TCGACCCGCA GATCAACAGC
TTCATCAGCA TCACCGACGA CCTGGCCCTG GCTCAGGCGC GTGCCGCCGA TGCCCGTCGC
GCCGCTGGCG AAACCGGCGT GCTGCTGGGT GCACCGATCG CCCACAAAGA CCTGTTCTGC
ACCAACGGCG TACGCACCAG CTGCGGCTCG AAGATGCTCG ACAACTTCAA GGCGCCCTAT
GACGCCACCG TGGTCGCCAA GCTGGCCGAA GCCGGCATGG TCACCCTGGG CAAGACCAAC
ATGGACGAGT TCGCCATGGG TTCGGCCAAC GAATCCAGCC ATTACGGCGC GGTGAAGAAC
CCGTGGAACC TCGAGCACGT TCCGGGCGGG TCGTCCGGTG GTTCGGCCGC TGCTGTGGCC
GCGCGCCTGC TGCCCGCCAC CACGGGCACC GACACCGGCG GCTCGATCCG CCAGCCAGCG
GCACTGACCA ACCTCACCGG CCTCAAGCCG ACGTACGGTC GTGTGTCGCG CTGGGGCATG
ATCGCCTACG CCTCCAGCCT CGACCAGGGC GGCCCACTGG CCCGCACCGC CGAGGACTGC
GCGTTGCTGC TGCAAGGTAT GGCCGGTTTC GACGCCAAGG ACTCCACCAG CATCGAAGAA
CCGGTGCCGG ACTACAGCGC CAGCCTGAAC GCTTCGCTGC AGGGCCTGCG CATCGGCCTG
CCGAAAGAGT ACTTCGGTGC CGGTCTAGAC CCACGCATCG CCGACCTGGT CCAGGCCAGC
GTCAAAGAGC TGGAAAAGCT CGGCGCAGTG GTCAAGGAAA TCAGCCTGCC GAACATGCAG
CATGCCATTC CGGCCTACTA CGTGATCGCC CCGGCTGAAG CCTCTTCCAA CCTGTCGCGT
TTCGACGGCG TACGCTTCGG CTACCGCTGT GAAGAGCCCA AAGACCTCAC CGACCTGTAC
AAGCGCTCAC GCGGCGAAGG GTTCGGCGTT GAAGTACAGC GCCGCATCAT GGTCGGTACC
TACGCCCTGT CGGCCGGCTA CTACGACGCC TATTACGTGA AGGCGCAGCA AATCCGCCGC
CTGATCAAGA ACGACTTCAT GGCCGCCTTC AACGATGTCG ACCTGATTCT CGGCCCGACC
ACGCCAAACC CGGCCTGGAA GCTTGGCGCC AAGAGCAGCG ACCCGGTTGC CGCCTATCTC
GAAGACGTCT ACACCATCAC CGCCAACCTG GCGGGCCTGC CTGGCCTGTC GATGCCAGCA
GGCTTCGTCG ACGGCCTGCC GGTCGGCGTG CAACTGCTGG CGCCGTACTT CCAGGAAGGC
CGCCTGCTCA ACGTCGCGCA CCGCTACCAA CAGGTGACCG ACTGGCATAC CCGCGCCCCC
AACGGCTTCT GA
 
Protein sequence
MHQLTLAEIA RGLADKSFSS EELTGALLAR IKQLDPQINS FISITDDLAL AQARAADARR 
AAGETGVLLG APIAHKDLFC TNGVRTSCGS KMLDNFKAPY DATVVAKLAE AGMVTLGKTN
MDEFAMGSAN ESSHYGAVKN PWNLEHVPGG SSGGSAAAVA ARLLPATTGT DTGGSIRQPA
ALTNLTGLKP TYGRVSRWGM IAYASSLDQG GPLARTAEDC ALLLQGMAGF DAKDSTSIEE
PVPDYSASLN ASLQGLRIGL PKEYFGAGLD PRIADLVQAS VKELEKLGAV VKEISLPNMQ
HAIPAYYVIA PAEASSNLSR FDGVRFGYRC EEPKDLTDLY KRSRGEGFGV EVQRRIMVGT
YALSAGYYDA YYVKAQQIRR LIKNDFMAAF NDVDLILGPT TPNPAWKLGA KSSDPVAAYL
EDVYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHRYQ QVTDWHTRAP
NGF