| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0971 |
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| Symbol | gatA |
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| ID | 5192698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1097987 |
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| End bp | 1099438 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585429 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001266316 |
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| Protein GI | 148546214 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.494174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.272239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAAT TGACCCTGGC CGAGATCGCC CGCGGACTCG CCGACAAATC GTTTTCTTCC
GAAGAGCTGA CCGGCGCCCT GCTGGCGCGC ATCAAACAGC TCGACCCGCA GATCAACAGC
TTCATCAGCA TCACCGACGA CCTGGCCCTG GCTCAGGCGC GTGCCGCCGA TGCCCGTCGC
GCCGCTGGCG AAACCGGCGT GCTGCTGGGT GCACCGATCG CCCACAAAGA CCTGTTCTGC
ACCAACGGCG TACGCACCAG CTGCGGCTCG AAGATGCTCG ACAACTTCAA GGCGCCCTAT
GACGCCACCG TGGTCGCCAA GCTGGCCGAA GCCGGCATGG TCACCCTGGG CAAGACCAAC
ATGGACGAGT TCGCCATGGG TTCGGCCAAC GAATCCAGCC ATTACGGCGC GGTGAAGAAC
CCGTGGAACC TCGAGCACGT TCCGGGCGGG TCGTCCGGTG GTTCGGCCGC TGCTGTGGCC
GCGCGCCTGC TGCCCGCCAC CACGGGCACC GACACCGGCG GCTCGATCCG CCAGCCAGCG
GCACTGACCA ACCTCACCGG CCTCAAGCCG ACGTACGGTC GTGTGTCGCG CTGGGGCATG
ATCGCCTACG CCTCCAGCCT CGACCAGGGC GGCCCACTGG CCCGCACCGC CGAGGACTGC
GCGTTGCTGC TGCAAGGTAT GGCCGGTTTC GACGCCAAGG ACTCCACCAG CATCGAAGAA
CCGGTGCCGG ACTACAGCGC CAGCCTGAAC GCTTCGCTGC AGGGCCTGCG CATCGGCCTG
CCGAAAGAGT ACTTCGGTGC CGGTCTAGAC CCACGCATCG CCGACCTGGT CCAGGCCAGC
GTCAAAGAGC TGGAAAAGCT CGGCGCAGTG GTCAAGGAAA TCAGCCTGCC GAACATGCAG
CATGCCATTC CGGCCTACTA CGTGATCGCC CCGGCTGAAG CCTCTTCCAA CCTGTCGCGT
TTCGACGGCG TACGCTTCGG CTACCGCTGT GAAGAGCCCA AAGACCTCAC CGACCTGTAC
AAGCGCTCAC GCGGCGAAGG GTTCGGCGTT GAAGTACAGC GCCGCATCAT GGTCGGTACC
TACGCCCTGT CGGCCGGCTA CTACGACGCC TATTACGTGA AGGCGCAGCA AATCCGCCGC
CTGATCAAGA ACGACTTCAT GGCCGCCTTC AACGATGTCG ACCTGATTCT CGGCCCGACC
ACGCCAAACC CGGCCTGGAA GCTTGGCGCC AAGAGCAGCG ACCCGGTTGC CGCCTATCTC
GAAGACGTCT ACACCATCAC CGCCAACCTG GCGGGCCTGC CTGGCCTGTC GATGCCAGCA
GGCTTCGTCG ACGGCCTGCC GGTCGGCGTG CAACTGCTGG CGCCGTACTT CCAGGAAGGC
CGCCTGCTCA ACGTCGCGCA CCGCTACCAA CAGGTGACCG ACTGGCATAC CCGCGCCCCC
AACGGCTTCT GA
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| Protein sequence | MHQLTLAEIA RGLADKSFSS EELTGALLAR IKQLDPQINS FISITDDLAL AQARAADARR
AAGETGVLLG APIAHKDLFC TNGVRTSCGS KMLDNFKAPY DATVVAKLAE AGMVTLGKTN
MDEFAMGSAN ESSHYGAVKN PWNLEHVPGG SSGGSAAAVA ARLLPATTGT DTGGSIRQPA
ALTNLTGLKP TYGRVSRWGM IAYASSLDQG GPLARTAEDC ALLLQGMAGF DAKDSTSIEE
PVPDYSASLN ASLQGLRIGL PKEYFGAGLD PRIADLVQAS VKELEKLGAV VKEISLPNMQ
HAIPAYYVIA PAEASSNLSR FDGVRFGYRC EEPKDLTDLY KRSRGEGFGV EVQRRIMVGT
YALSAGYYDA YYVKAQQIRR LIKNDFMAAF NDVDLILGPT TPNPAWKLGA KSSDPVAAYL
EDVYTITANL AGLPGLSMPA GFVDGLPVGV QLLAPYFQEG RLLNVAHRYQ QVTDWHTRAP
NGF
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