| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0968 |
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| Symbol | |
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| ID | 5190377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1094923 |
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| End bp | 1095966 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585426 |
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| Product | CaCA family Na(+)/Ca(+) antiporter |
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| Protein accession | YP_001266313 |
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| Protein GI | 148546211 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0530] Ca2+/Na+ antiporter |
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| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein
[TIGR00378] calcium/proton exchanger (cax) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.798844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.110014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGTTG CCCTGTTGTT GCTGATCGGT GGCGCCGAGC TATTGGTGCG CTCCGCCTTG
CGCCTGGCGC AGCGCCTGCA CGTTCGCCCG CTGATCATAG GCCTGAGCCT GGTGGCCTTC
GGCAGTACCG CGCCACAATT GACCGTAAGC CTGCAGGCCG CCTACCAGGG TGCGCCGGAT
GTGGCAGTAG GCAGCGTGAT CGGTAGCAAC ATCTTCAATG TACTGGTCAT TCTCGGCCTG
GCCGCGCTGA TCATCCCGCT GCGGGTGTCA CGCCAGCTGG TGCGCCTGGA CATTCCCTTG
ATGATCCTTG CCAGCGGGCT GGTGTATGCA CTGTCCGCCA ATGCCCACCT GGGCAGGGTT
GAAGGGGCAC TGCTATTGCT GGGGCTGGCC GGTTACCTGG CAATGCTCTG GCATCAGTCG
CGCCATTACG CACGCACCTA CCCGGCCCCG GACGCCGCCA GGTCCGGTGC CGGGCGCTTC
TGGTCAGGTA CGCTGCTGCA GATACTGGTC GGCCTTGGCC TGCTGAGCCT GGCGGGCCAC
TTGCTACTGG AAGCTGCCAT CGAGATGGCC ACCGACCTGG GCCTGTCCGA GCGTATTATC
GGCCTGACGG TCGTCGCCAT CTGCACCTCC ATGCCGGAAC TGGCCGCTGC GCTGATCGCC
GCCTTGCGTG GCGAACGGGA GATCGCCGTG GGCACGGTGA TCGGCAGCAA CCTGTTCAAC
CTGCTGGCCG TACTGGGCCT GACCGCACTG ATCACCCCGG AACCCCTGTC GATCTCGCCT
AACGCGCTGT CTTTCGATCT GCCTGTAATG CTCGGCGTTG CTGTCCTGAG CCTGCCAGTG
TTCTATTCCG GTTACCGCAT CACTCGCGCC GAAGGCCTGG TGTTTCTTTG CCTGTACCTG
GCCTACGGCC TTCATGTGGC GGCTTTTACC ATGGGTATGC CGCTGGCTGG CCGCCTGGAG
CGATTGATGC TGTTCTATGT ACTGCCGGTG CTCGCTGCGG TGTTGCTGTA CACCACTGTG
CGTGCCTGGC GGAGGCAGCA TTGA
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| Protein sequence | MGVALLLLIG GAELLVRSAL RLAQRLHVRP LIIGLSLVAF GSTAPQLTVS LQAAYQGAPD
VAVGSVIGSN IFNVLVILGL AALIIPLRVS RQLVRLDIPL MILASGLVYA LSANAHLGRV
EGALLLLGLA GYLAMLWHQS RHYARTYPAP DAARSGAGRF WSGTLLQILV GLGLLSLAGH
LLLEAAIEMA TDLGLSERII GLTVVAICTS MPELAAALIA ALRGEREIAV GTVIGSNLFN
LLAVLGLTAL ITPEPLSISP NALSFDLPVM LGVAVLSLPV FYSGYRITRA EGLVFLCLYL
AYGLHVAAFT MGMPLAGRLE RLMLFYVLPV LAAVLLYTTV RAWRRQH
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