Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0961 |
Symbol | |
ID | 5190768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1088938 |
End bp | 1089522 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585419 |
Product | hypothetical protein |
Protein accession | YP_001266306 |
Protein GI | 148546204 |
COG category | [S] Function unknown |
COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.132196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTACC TCGCACACTT GCACCTGGGC GGCCCGGCGC CGCAACAACT GCTTGGCAGC CTGTATGGCG ACTTTGTCAA AGGCTCCTTG GAAGGGCGCT TTCCGCCTGC GCTGGAGGCG GCCATCCGAC TGCACCGGCA TATCGACAGT TACACTGACC AGCATCCGGT GGTGCTGGCG GCTCTGGCAC GTTTTCCGCG CGAGCGGCGG CGCTTTGCCG GCATCGTCCT GGATGTGTTT TTCGACCATT GCCTGGCACG GCACTGGGGC AACTACGCCG ATCAGCCGCT GGAGCAGTTC ACTGGTGCGT TTTATCGGGT ATTGCTGGCA GAGCCCGAGC TGCCTGGGCG GCTGGCGCGG ATTGCGCCGT TCATGGCAGC GGATGACTGG CTAGGGGCGT ATGGCGATTT CGACACGCTG GAGCAGGTGT TCAACGGCAT TGCCCGGCGC TTGTCGCGGC CTGAGGGGAT GGCTGGGGTG ATGGTGGAAC TGGAGCGGCT GTATGAGCCG CTGCTGGCGG ATTTTCGCGA GTTCTACCCG CAACTGCAGG CGTTTGCGGC GGTAGGGCGG ATGTCTGACA GTTAG
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Protein sequence | MNYLAHLHLG GPAPQQLLGS LYGDFVKGSL EGRFPPALEA AIRLHRHIDS YTDQHPVVLA ALARFPRERR RFAGIVLDVF FDHCLARHWG NYADQPLEQF TGAFYRVLLA EPELPGRLAR IAPFMAADDW LGAYGDFDTL EQVFNGIARR LSRPEGMAGV MVELERLYEP LLADFREFYP QLQAFAAVGR MSDS
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