| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0957 |
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| Symbol | |
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| ID | 5190927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1085387 |
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| End bp | 1086379 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585415 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001266302 |
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| Protein GI | 148546200 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.387082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.15426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTC TGGTCACCGG CGCGAGTGGC TTCATTGGCG GGCGTTTTGC GCGTTTCGCC
CTGGAGCAAG GCCTGGACGT GCGCGTCAGC GGCCGCCGTG CCGAAGGGGT CGAGCATCTG
GTCAAGCGTG GCGCACAGTT CATCCCGGGT GATCTGGGTG ACGCCGAGCT GGCCCGGCGT
TTGTGCCAGG GTGTCGAAGC CGTGGTGCAT TGCGCTGGCG CGGTGGGTAA CTGGGGGCGC
TATCAGGATT TCTACCAAGG CAACGTGGTG GTGACCGAGA ACGTGGTCGA GGGCTGCCTG
AAAGAGCACG TACGGCGCCT GGTGCATCTG TCTTCGCCGT CGATCTACTT CAATGGCCGT
TCGCGTCTGG ACGTCCGTGA AGACCAGGTA CCGCGTCGCT TCCACGATCA CTATGGGCAA
ACCAAGTACC TGGCCGAGCA GAAAGTGTTC GGTGCCCAGG AGTTCGGCCT GGAAGTGCTG
GCGCTGCGTC CGCGCTTCGT TACCGGCGCG GGCGATGCCA GTATCTTCCC GCGGCTGATG
CAGATGCAGC GCAAAGGGCG TGTGGCGATC ATCGGCAACG GCCTGAACAA GGTCGATTTC
ACCAGTGTGC ACAACCTCAA CGAGGCGCTG CTAAGTGCAT TGTTCGCTGA TGACCGGGCG
CTGGGCCAGG CTTACAACAT AAGCAACGGC CAGCCACTGC CGCTGTGGGA CGTGGTCAAC
TACGTGATGC GCCAGATGCA GCTTCCCCAG GTGACCCGCT ACCGTTCCTA TGGCCTTGCC
TATAGCCTGG CCGCGCTGAA CGAGGCGGCC TGCATGTTAT GGCCAGGGCG CCCGCAACCG
ACTTTGTCGC GCCTGGGGAT GCAGGTGATG AGCCGTGATT TCACCCTGGA TATCAGCCGT
GCCCGGCAGT ACCTGGACTA CCAGCCCAAG GTCAGCCTGT GGACGGCGCT GGATGAATTC
TGCGGCTGGT GGAAGCATTT GCCGCCCGGC TGA
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| Protein sequence | MRILVTGASG FIGGRFARFA LEQGLDVRVS GRRAEGVEHL VKRGAQFIPG DLGDAELARR
LCQGVEAVVH CAGAVGNWGR YQDFYQGNVV VTENVVEGCL KEHVRRLVHL SSPSIYFNGR
SRLDVREDQV PRRFHDHYGQ TKYLAEQKVF GAQEFGLEVL ALRPRFVTGA GDASIFPRLM
QMQRKGRVAI IGNGLNKVDF TSVHNLNEAL LSALFADDRA LGQAYNISNG QPLPLWDVVN
YVMRQMQLPQ VTRYRSYGLA YSLAALNEAA CMLWPGRPQP TLSRLGMQVM SRDFTLDISR
ARQYLDYQPK VSLWTALDEF CGWWKHLPPG
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