Gene Pput_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0955 
Symbol 
ID5190326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1083746 
End bp1084345 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content68% 
IMG OID640585413 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001266300 
Protein GI148546198 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.599667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.584278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCAAA GCTATCTCAA TGGCATGCTG GTGGCCTTCG GCCTGATCAT GGCCATCGGC 
GCCCAGAACG CCTTCGTCCT CGCCCAGAGC CTGCGCCGTG AGCATCACCT TCCGGTGGCA
GCGCTGTGCA TCGTCTGTGA CGCCATCCTC GTGGCCGCCG GGGTATTCGG ACTGGCCACC
GTGCTGGCAC ACAACCCGAC CTTGCTGGCA ATCGCCCGCT GGGGCGGCGC AGTGTTCCTG
ATCTGGTACG GCGCCAAGGC GCTGCGCAGT GCCTGCTCCA AGCAGAGCCT GCAGCACCAG
CAAGGCCAGG GCGTTCGCTC TCGGCGCGCC GTGCTGCTCA GCGCCCTGGC GGTGACCCTG
CTGAACCCGC ACGTGTACCT CGATACGGTG TTGCTGATCG GCTCGCTGGG CGCCCAACAG
TCCGCCCCTG GCGCCTACGT GGCCGGTGCG GCCAGCGCTT CGCTGCTGTG GTTCTCGACC
CTGGCCATTG GCGCGGCGTG GCTGGCACCG TGGCTGGCGC GGCCGGCGAC CTGGCGCATG
CTCGACCTGA TGGTGGCGGT GATGATGTTC GCGGTGGCGG CGCAATTGAT CTTCAACTGA
 
Protein sequence
MWQSYLNGML VAFGLIMAIG AQNAFVLAQS LRREHHLPVA ALCIVCDAIL VAAGVFGLAT 
VLAHNPTLLA IARWGGAVFL IWYGAKALRS ACSKQSLQHQ QGQGVRSRRA VLLSALAVTL
LNPHVYLDTV LLIGSLGAQQ SAPGAYVAGA ASASLLWFST LAIGAAWLAP WLARPATWRM
LDLMVAVMMF AVAAQLIFN