Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0955 |
Symbol | |
ID | 5190326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1083746 |
End bp | 1084345 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640585413 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001266300 |
Protein GI | 148546198 |
COG category | [R] General function prediction only |
COG ID | [COG1279] Lysine efflux permease |
TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.599667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.584278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCAAA GCTATCTCAA TGGCATGCTG GTGGCCTTCG GCCTGATCAT GGCCATCGGC GCCCAGAACG CCTTCGTCCT CGCCCAGAGC CTGCGCCGTG AGCATCACCT TCCGGTGGCA GCGCTGTGCA TCGTCTGTGA CGCCATCCTC GTGGCCGCCG GGGTATTCGG ACTGGCCACC GTGCTGGCAC ACAACCCGAC CTTGCTGGCA ATCGCCCGCT GGGGCGGCGC AGTGTTCCTG ATCTGGTACG GCGCCAAGGC GCTGCGCAGT GCCTGCTCCA AGCAGAGCCT GCAGCACCAG CAAGGCCAGG GCGTTCGCTC TCGGCGCGCC GTGCTGCTCA GCGCCCTGGC GGTGACCCTG CTGAACCCGC ACGTGTACCT CGATACGGTG TTGCTGATCG GCTCGCTGGG CGCCCAACAG TCCGCCCCTG GCGCCTACGT GGCCGGTGCG GCCAGCGCTT CGCTGCTGTG GTTCTCGACC CTGGCCATTG GCGCGGCGTG GCTGGCACCG TGGCTGGCGC GGCCGGCGAC CTGGCGCATG CTCGACCTGA TGGTGGCGGT GATGATGTTC GCGGTGGCGG CGCAATTGAT CTTCAACTGA
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Protein sequence | MWQSYLNGML VAFGLIMAIG AQNAFVLAQS LRREHHLPVA ALCIVCDAIL VAAGVFGLAT VLAHNPTLLA IARWGGAVFL IWYGAKALRS ACSKQSLQHQ QGQGVRSRRA VLLSALAVTL LNPHVYLDTV LLIGSLGAQQ SAPGAYVAGA ASASLLWFST LAIGAAWLAP WLARPATWRM LDLMVAVMMF AVAAQLIFN
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