Gene Pput_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0941 
Symbol 
ID5190741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1066768 
End bp1068078 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content64% 
IMG OID640585399 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001266286 
Protein GI148546184 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTTA AGCAAAGCCT TGCCCAGCGC ATCATCATCG CCTTTGCCCT GATGAGTGCG 
CTGGTGGCCG GGGCCTTCGC ATTCGGTATC GTCGGCACGG TGCACCTGGT CGAAGAGCGA
CTGATCTCCT CGGTACTGGG CGGTGACCTG CAGCGCCTGT TGCGTATGGA CAGCGTCAGT
GACTGGAGTC ATCGGCCTCG CCCAGACCAG CTGTTCTATT TCAGTGGCGG GCGTGACGAC
TTCGAGCTGC CCAAGGACCT GCGGCACCTC GACCGCGGTT TCCACGAAGT GTTCCGAGAC
CAGCTGTCCT ACCACGCCAT GGTCGAGATT GTTGATGGTC GCCGCTATGT ACTGCTGCAG
GACCAGAGCG ACTTCGAGGA GCGCGAGCGC GTACTGTTTG CCGTGGTTGT GGTGGGCTTC
GTGCTCAGCC TGGTGTTGGC GGTCATCCTT GGCTGGCTGG TTGCACGTCG GGTAATGGCA
CCGGTCATCC GCCTGGCGCG TCAGGTGCGA CACCGCGATC AACTACTGGG CCTGGCCCCG
CCGCTGGCTC CGGATTATGC GGCAGACGAA GTCGGCCAGC TTGCAGTGGC TTTCGACGAC
ACCCTGGGCC GCCTGCGTGA TGCGCTGACC CGCGAGCGGC TGTTCACCAG CGACGTCAGC
CACGAGCTGC GCACGCCGTT GATGGTGTTG GCGACCTCGT GTGAGCTTCT GATGGAAAAC
CCCGGCCTCG ATGCCCGTGC GCGTAGCCAG GTGGAGCGCG TGGCGCGGGC CACCGAAGAA
ATGCGCGAGC TGGTCAAGAC CTTCCTCATG TTGGCCCGCG CGCAGCGTGA TGAGGGGGCA
GTGGCGTCAC GGGCGACCCT GCGCGAAGTG GCCGACGAGC TCATCGGGGT GTGGCGCGAC
ACCATCGAAC AGAAAGGCCT CACCCTGTAT TTCGATGGTC GCGTGAGCGC TAGCCCTGTG
CTGTACAACG CCACCTTCCT GCAGTCGGTG ATGGGCAACC TGCTGCGCAA TGCGGCGCAC
TACACCGACA GTGGGTATAT CCGCCTGAGC CTGGAAGCCA ACGGTTTCAG CGTAGAGGAC
AGCGGCGTGG GTATCCCCGA AGAGCAGCGC GAGGCCATGT TCAGGCCGTT CGTGCGCGGC
GATGAACGGC GTGGCGAGGG GCTTGGGCTG GGGCTTTCGC TGGTGCAGCG GATCTGCGAC
GACCAAGGTT GGCGTGTCAC CCTGACATCC ACCTTGCCGC ATGGCTGCCG CTTCCAGGTG
GACCTGAGCA ACACCGTGGC CAAAGGCGAC CCGGACGCCC TGGTCGAGTA A
 
Protein sequence
MEFKQSLAQR IIIAFALMSA LVAGAFAFGI VGTVHLVEER LISSVLGGDL QRLLRMDSVS 
DWSHRPRPDQ LFYFSGGRDD FELPKDLRHL DRGFHEVFRD QLSYHAMVEI VDGRRYVLLQ
DQSDFEERER VLFAVVVVGF VLSLVLAVIL GWLVARRVMA PVIRLARQVR HRDQLLGLAP
PLAPDYAADE VGQLAVAFDD TLGRLRDALT RERLFTSDVS HELRTPLMVL ATSCELLMEN
PGLDARARSQ VERVARATEE MRELVKTFLM LARAQRDEGA VASRATLREV ADELIGVWRD
TIEQKGLTLY FDGRVSASPV LYNATFLQSV MGNLLRNAAH YTDSGYIRLS LEANGFSVED
SGVGIPEEQR EAMFRPFVRG DERRGEGLGL GLSLVQRICD DQGWRVTLTS TLPHGCRFQV
DLSNTVAKGD PDALVE