Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0941 |
Symbol | |
ID | 5190741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1066768 |
End bp | 1068078 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640585399 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001266286 |
Protein GI | 148546184 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTA AGCAAAGCCT TGCCCAGCGC ATCATCATCG CCTTTGCCCT GATGAGTGCG CTGGTGGCCG GGGCCTTCGC ATTCGGTATC GTCGGCACGG TGCACCTGGT CGAAGAGCGA CTGATCTCCT CGGTACTGGG CGGTGACCTG CAGCGCCTGT TGCGTATGGA CAGCGTCAGT GACTGGAGTC ATCGGCCTCG CCCAGACCAG CTGTTCTATT TCAGTGGCGG GCGTGACGAC TTCGAGCTGC CCAAGGACCT GCGGCACCTC GACCGCGGTT TCCACGAAGT GTTCCGAGAC CAGCTGTCCT ACCACGCCAT GGTCGAGATT GTTGATGGTC GCCGCTATGT ACTGCTGCAG GACCAGAGCG ACTTCGAGGA GCGCGAGCGC GTACTGTTTG CCGTGGTTGT GGTGGGCTTC GTGCTCAGCC TGGTGTTGGC GGTCATCCTT GGCTGGCTGG TTGCACGTCG GGTAATGGCA CCGGTCATCC GCCTGGCGCG TCAGGTGCGA CACCGCGATC AACTACTGGG CCTGGCCCCG CCGCTGGCTC CGGATTATGC GGCAGACGAA GTCGGCCAGC TTGCAGTGGC TTTCGACGAC ACCCTGGGCC GCCTGCGTGA TGCGCTGACC CGCGAGCGGC TGTTCACCAG CGACGTCAGC CACGAGCTGC GCACGCCGTT GATGGTGTTG GCGACCTCGT GTGAGCTTCT GATGGAAAAC CCCGGCCTCG ATGCCCGTGC GCGTAGCCAG GTGGAGCGCG TGGCGCGGGC CACCGAAGAA ATGCGCGAGC TGGTCAAGAC CTTCCTCATG TTGGCCCGCG CGCAGCGTGA TGAGGGGGCA GTGGCGTCAC GGGCGACCCT GCGCGAAGTG GCCGACGAGC TCATCGGGGT GTGGCGCGAC ACCATCGAAC AGAAAGGCCT CACCCTGTAT TTCGATGGTC GCGTGAGCGC TAGCCCTGTG CTGTACAACG CCACCTTCCT GCAGTCGGTG ATGGGCAACC TGCTGCGCAA TGCGGCGCAC TACACCGACA GTGGGTATAT CCGCCTGAGC CTGGAAGCCA ACGGTTTCAG CGTAGAGGAC AGCGGCGTGG GTATCCCCGA AGAGCAGCGC GAGGCCATGT TCAGGCCGTT CGTGCGCGGC GATGAACGGC GTGGCGAGGG GCTTGGGCTG GGGCTTTCGC TGGTGCAGCG GATCTGCGAC GACCAAGGTT GGCGTGTCAC CCTGACATCC ACCTTGCCGC ATGGCTGCCG CTTCCAGGTG GACCTGAGCA ACACCGTGGC CAAAGGCGAC CCGGACGCCC TGGTCGAGTA A
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Protein sequence | MEFKQSLAQR IIIAFALMSA LVAGAFAFGI VGTVHLVEER LISSVLGGDL QRLLRMDSVS DWSHRPRPDQ LFYFSGGRDD FELPKDLRHL DRGFHEVFRD QLSYHAMVEI VDGRRYVLLQ DQSDFEERER VLFAVVVVGF VLSLVLAVIL GWLVARRVMA PVIRLARQVR HRDQLLGLAP PLAPDYAADE VGQLAVAFDD TLGRLRDALT RERLFTSDVS HELRTPLMVL ATSCELLMEN PGLDARARSQ VERVARATEE MRELVKTFLM LARAQRDEGA VASRATLREV ADELIGVWRD TIEQKGLTLY FDGRVSASPV LYNATFLQSV MGNLLRNAAH YTDSGYIRLS LEANGFSVED SGVGIPEEQR EAMFRPFVRG DERRGEGLGL GLSLVQRICD DQGWRVTLTS TLPHGCRFQV DLSNTVAKGD PDALVE
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