| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0922 |
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| Symbol | |
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| ID | 5195371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1046813 |
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| End bp | 1048192 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585380 |
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| Product | outer membrane porin |
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| Protein accession | YP_001266267 |
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| Protein GI | 148546165 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.535028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGTAT TCACCTTGAC CGCACTGGCG TTATCCATCG GTGCCTTATC CACGGTGGCC
CAGGCAGATC CGCAGAGCCA GGACTACCTC CCGCTCACCC TCAAAAGCAG CAGCGAGCAA
GCGCAAGCCA GCGGCTTCAT CAACGGCCAG AGCCTGTCCG GTAGCACCCG CAACTGGTAC
GCCCGCGAAC GTGCCGCACG CGCGCCGCTG TGGAAGTACT ACAAGAACGA CGGCACCCGC
CACGACACCC ACAGCCGTGA AAACTGGGTC CAGGGCACCA TCCTCAATTA CAGCTCCGGC
TTCACCCAGG GCACCGTGGG CTTCGCCGTC GAGGCTGCCG GCTACAACGC CATCGCCCTG
CAGCAGAGCC GCGAAGCCAT CGCCGGCCCC AACAACCGCA CCCTCACCCA CAGCGATGGC
GACCCCATCG GCCAGTGGAG CAAACTGGGC CTGGGCAATA TCAAGGCGCG CGTGTCCAAC
ACCACCCTTA CCCTTGGCCG CCAGTCGGTG GACACGCCGA TGATCGCCTA CATCGGCAAC
CGCGCCCTGC CCTCGAGCTT CCAGGGCGCG TTCCTGCACA GCGCTGAATT CGACAACCTC
AGCCTCGACC TGGGCACCTT CGACCGCGTC TCGCCACGTA CCGAACAGAG CCTCAGCAAG
TTCCGCAGCG AGTACAGCGC CACCGGCGTG GAAACCGACC GTGCCAGCAC CGCCGGCATC
AACTACCAGC CGTTCAAGAG CCTGAGTACC AGCCTGTACG CCACCAAGGT CGACGACTTC
TGGAACCAGT ACTACTTCGG CGCCAACCAT GTGCTCGGCG ACAGCGCAGT GCTCAGCCTG
AGCACCGGCC TGAACTACTA CAAGACCGTC GACGCCGGCA GCCAGAAAAT GGGCAAGATC
GACAACGACA CCTACAGCCT GTCACTGGGC CTGACCCATC AGGCCCACAC CCTCAGCGCC
TCCTGGCAGC AGGTCAACGG CAATGAGTAC TTCGACTACC TGCACGAAAC CAACGGCATC
TTCCTGGCCA ACTCGCTGCT GTCGGACTTC AACGGCCCCA ACGAGAAATC GCTGCAGATT
TCCTATGTGC TGAACATGGC GCCCTATGGC GTACCTGGCC TGAAGTTCAA CCTGTACAAC
GCCCGCGGCT GGGGTATCGA CGGCACTCAC TACCGCGGCA CTGCCTACGA CGTGAATGGC
CTGGATGGCG AAACCCACTA CGAGTGGGGT ATCGGCACCA GCTACGCGCT GCAGAGCGGG
CCGCTGAAAG ACACCAGCAT CCGCGCCACC TACACCACCC ATCGCGCCAG CAAGGCCCAG
GGCGATGGCA GCCTGGATGA GTTCCGCGTG GTCACCACCA TTCCGTTCAA CATTCTCTGA
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| Protein sequence | MKVFTLTALA LSIGALSTVA QADPQSQDYL PLTLKSSSEQ AQASGFINGQ SLSGSTRNWY
ARERAARAPL WKYYKNDGTR HDTHSRENWV QGTILNYSSG FTQGTVGFAV EAAGYNAIAL
QQSREAIAGP NNRTLTHSDG DPIGQWSKLG LGNIKARVSN TTLTLGRQSV DTPMIAYIGN
RALPSSFQGA FLHSAEFDNL SLDLGTFDRV SPRTEQSLSK FRSEYSATGV ETDRASTAGI
NYQPFKSLST SLYATKVDDF WNQYYFGANH VLGDSAVLSL STGLNYYKTV DAGSQKMGKI
DNDTYSLSLG LTHQAHTLSA SWQQVNGNEY FDYLHETNGI FLANSLLSDF NGPNEKSLQI
SYVLNMAPYG VPGLKFNLYN ARGWGIDGTH YRGTAYDVNG LDGETHYEWG IGTSYALQSG
PLKDTSIRAT YTTHRASKAQ GDGSLDEFRV VTTIPFNIL
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