| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0921 |
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| Symbol | |
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| ID | 5195370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1045124 |
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| End bp | 1046734 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585379 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001266266 |
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| Protein GI | 148546164 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.776476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGAG CTTTCATGAA ATCGCGGCCG TTGCGCCTAG CCCTGGTCGC GCTGCTTCTG
GGCGGCGCCA CGCAACTGGC GGCCAAACCG CTGGTGGTGT GTACAGAAGC CAGCCCGAAA
GGGTTCGACA TCGTCCAGTA CACCACCGCA GTCACCGCCG ATGCCTCGGC CGAGACAGTG
TTCAACCGCC TGGTCGACTT CAAACCCGGC ACCACCGAGA TCCAGCCGGC CCTGGCCGAG
CGCTGGGACA TTTCAGCCGA CGGTCTGACC TACACCTTCC ATCTGCGTCA GGGGGTGAAG
TTCCACACCA CCGACTACTT CAAGCCAACT CGTGACTTCA ACGCCGATGA CGTGCTGTGG
AGCCTCAATC GCCAGCTCGA CCCGAACCAC CCCTGGCATG ACAAGACCAG CGTCGGCTAC
CCGTACTTCG AGAGCATGGG GTTCAAGGAA CTGCTCAAGT CAGTCAGCAA GGCTGACGAG
CACACCGTGG TGATTACCCT CAGCCGACCG GAAGCGCCGT TCCTGCGCGA CATGGCCATG
GGCTTTACCT CGATCTACTC CGCCGAATAC GGCGACCAGT TGCTCAAGTC TGGCAAGACC
GCCGAGCTGA ACAGCAAGCC GATCGGCACC GGCCCTTTCA TTTTCCAGCG TTACAACAAG
GACGCCCAGG TCCGCTTCAA GCCCAACCCG GACTATTTCC GCGGCAAGCC GCCGGCCGAT
GCGCTGGTGT TCGCCATCGC CATCGACAGC AACGTGCGCC TGCAGAAACT GCGCGCCAAC
GAGTGCCAGG TGGCGCTCTA TCCCAAGCCC GATGACGTGC CGTCGATCAA GCAAGACCCG
AAACTCAAGG TTGAAGAAAT CGAGGCCTTG GTCACCGGCT ACATCGCCAT GAATACCCAG
CACAAATACC TCAACGACGT GCGTGTGCGT AAAGCCATCA ACATGGCCTT CGACCGCCAG
ACCCATGTCG ACCAACTGTT TGGCAAAGGC AACGCGCTGG TGGGTGTAAA CCCTTACCCA
CCCACCATGA TCGGCTACAA CACCCACAAC CAGAACCCAA CGCGCGACCT CGACAAAGCC
CGCGCACTGC TCAGTCAGGC CGGTGTACCC GAGGGCACGG TAATCACCCT GTTCACCCGC
AACGGCGGCG GCCCGACCAA CCCCAACCCG CGCCTGTCCG CCGAGATGCT GCAAGCCGAC
CTCAAACAGA TCGGCCTCAA GCTGGATATC CGCGTCATGG AATGGGCCGA GATGCTGCGC
CGGGCGAAGA ACGGCGAAGC CGACCTGGTG TCCACCGGCT GGGCCGGCGA CAACGGCGAC
CCGGACAACT TCCTCAGCCC GCTGCTCAGT TGCGATGCAG TGAAAAGTGG CGAGAACTAT
GCGCGCTGGT GCAACCCCAA GTTCCAGGAG CTGATCAGCC GCGCCCGCGA AGTGATCGAC
AACGACGAGC GTGCAAGGCT CTATAACGAG GCATTGAAAG TGTACGATGA CGAACAACCC
TGGATCAGCA TGGCTCATCC AAAGATGTTC ACCGCCATGC GTGACAACGT GGAGGGCTAC
GTGATCAACC CTCTGACCAA CAACAACTTC GCCACCACCA AGGTGAAGTA G
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| Protein sequence | MHRAFMKSRP LRLALVALLL GGATQLAAKP LVVCTEASPK GFDIVQYTTA VTADASAETV
FNRLVDFKPG TTEIQPALAE RWDISADGLT YTFHLRQGVK FHTTDYFKPT RDFNADDVLW
SLNRQLDPNH PWHDKTSVGY PYFESMGFKE LLKSVSKADE HTVVITLSRP EAPFLRDMAM
GFTSIYSAEY GDQLLKSGKT AELNSKPIGT GPFIFQRYNK DAQVRFKPNP DYFRGKPPAD
ALVFAIAIDS NVRLQKLRAN ECQVALYPKP DDVPSIKQDP KLKVEEIEAL VTGYIAMNTQ
HKYLNDVRVR KAINMAFDRQ THVDQLFGKG NALVGVNPYP PTMIGYNTHN QNPTRDLDKA
RALLSQAGVP EGTVITLFTR NGGGPTNPNP RLSAEMLQAD LKQIGLKLDI RVMEWAEMLR
RAKNGEADLV STGWAGDNGD PDNFLSPLLS CDAVKSGENY ARWCNPKFQE LISRAREVID
NDERARLYNE ALKVYDDEQP WISMAHPKMF TAMRDNVEGY VINPLTNNNF ATTKVK
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