| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0917 |
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| Symbol | dppF |
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| ID | 5191801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1041138 |
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| End bp | 1042106 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585375 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001266262 |
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| Protein GI | 148546160 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.400518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.687731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCG TTCTATCTGC CCGGGAGCTG ACCCGGCACT ACGAAGTCTC CCGCGGGCTG
TTCAAGGGCC ATGCGCTGGT GCGCGCGCTC AATGGCGTGT CGTTCGAACT GGAGGCCGGC
AAGACCCTGG CCGTGGTCGG CGAGTCGGGC TGCGGCAAGT CGACCCTGGC CCGCGCCCTG
ACCCTGATCG AAGAGCCGTC GTCCGGCTCG CTGCAGATTG CCGGCACTGA GGTGAAGGGC
GCCAGCAAGG CAGAGCGCAA ACAACTGCGC CGCGATGTGC AGATGGTGTT CCAGAGCCCC
TACGCCTCGC TCAACCCACG GCAGAAGATC GGTGACCAAC TGGCCGAACC GCTGCTGATC
AACACCTCGC TGAGCAAGGC CGAGCGCCGC GACAAAGTGC AGAAGATGAT GGAGCAGGTC
GGCCTGCGCC CCGAGCACTA CCAGCGCTAC CCTCACATGT TCTCTGGCGG CCAGCGCCAG
CGTATCGCCC TGGCCCGGGC GATGATGCTG CAGCCCAAGG TGCTGGTGGC TGACGAACCG
ACCTCCGCGC TGGACGTGTC GATTCAGGCG CAGGTGCTGA ACCTGTTCAT GGATCTGCAG
AAGGAGTTCA ACACTGCTTA CGTGTTCATC TCGCACAACC TGGCGGTGGT ACGGCATGTG
GCGGATCAGG TACTGGTGAT GTACCTGGGG CGGCCGGCGG AGATGGGGCC GAAGGAGGAC
ATCTACAACA AGCCGCTGCA TCCCTATACC CAGGCGCTGC TGTCGGCGAC ACCGGCGATT
CATCCAGACC CGTTGAAGCC GAAGATTCGT ATCGTCGGGG AGCTCCCCAA CCCGCTGAAC
CCGCCGGATG GGTGTGCCTT CCACAAACGC TGCCCGTATG CGACCGAGCG GTGTGCCAAG
GAGGTGCCGG CACTGAGGCA GGTGAGTACG CGGCAGGTTG CCTGCCACTA TGCGGAGCAG
TTTCTTTAA
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| Protein sequence | MAVVLSAREL TRHYEVSRGL FKGHALVRAL NGVSFELEAG KTLAVVGESG CGKSTLARAL
TLIEEPSSGS LQIAGTEVKG ASKAERKQLR RDVQMVFQSP YASLNPRQKI GDQLAEPLLI
NTSLSKAERR DKVQKMMEQV GLRPEHYQRY PHMFSGGQRQ RIALARAMML QPKVLVADEP
TSALDVSIQA QVLNLFMDLQ KEFNTAYVFI SHNLAVVRHV ADQVLVMYLG RPAEMGPKED
IYNKPLHPYT QALLSATPAI HPDPLKPKIR IVGELPNPLN PPDGCAFHKR CPYATERCAK
EVPALRQVST RQVACHYAEQ FL
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