| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0915 |
|---|
| Symbol | |
|---|
| ID | 5194880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1039536 |
|---|
| End bp | 1040516 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640585373 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001266260 |
|---|
| Protein GI | 148546158 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.709424 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTATC AATGCTATCT TGCGAAAATT CATGTTGATA TGTTGCCTTG TATGGCGGCA
TTTGCGGTCG TGGTTGAAAC TGGAAGTTTT GTAGACGCAT CTGCCCGATT GGGGGTGACG
GCGTCTGCAG TCAGCAAACA AGTATCAAAG CTTGAAAATG CCTTGTCGAT TCGGTTGCTT
GAGCGCAGTA CGCGGCAGCT CAAAGTCAAT GCCGAGGGAG CACAGGTCTA CTCGCACTGC
AAAGAGCTGC TTGAGTCGTC AGCAAATATA TTTCGATTCA AGGATCGATT TCTCGAAAGC
CCGCAAGGGC TTATTCGTGT CGCGGTGCCG CGTTCGTTGT ATGTGATATG TCATCAACTC
GTTCCTGAGT TTCTTGAACG CTATCCCAGC GTCAATGTTC AGCTCATTTC TAATGAAGGG
GAGTTTGACT TCATCGCTGA GGGTATAGAC GTTGGCATAA GAGTCACTGA CAGCCCACCC
TTAGGGCTGG TGGCACGCAA GTTGTTTCCT GTCGACTTTG TTGTCTGCGC ATCGAACAGC
TACCTTGAAA AACACGGCCG CCCCGTTCAC CCCTCGGAAT TGACGGAACA CAGCTGCATA
CCGTTTTCCG AGGTCAGTGA GAAGCAAAAT TGGAAATTCA CTTCGGCACA AGGCGTGTGT
GAGGTCAGTG TTTCGGGCCG CTACGTTTCA GACAGCCCAG AAGCGGTGTT AAATGCCACC
CTCTCGGGGT TGGGGATTTC CTGCCTGCCG GTCAGGCTGG CCGCCGAAGC GATTACCACC
AATGTACTGG TGGAAGTTTT CCCAGAATGG AAATATGTGG GGACGTTACA GGGAATGGCA
TGGATCCTCC ATCAGCCTGG ACGGCATGTG TCACAGAAGG TGAAGGTGAT GGTCGATTAC
CTAGTCGGCG AGCTGCGCAG GACGGGCGGG GTTGATGGCT GGATAACACA ACCCACGCTG
TTAGAGCGGA TAAGGAACTA G
|
|---|
| Protein sequence | MDYQCYLAKI HVDMLPCMAA FAVVVETGSF VDASARLGVT ASAVSKQVSK LENALSIRLL
ERSTRQLKVN AEGAQVYSHC KELLESSANI FRFKDRFLES PQGLIRVAVP RSLYVICHQL
VPEFLERYPS VNVQLISNEG EFDFIAEGID VGIRVTDSPP LGLVARKLFP VDFVVCASNS
YLEKHGRPVH PSELTEHSCI PFSEVSEKQN WKFTSAQGVC EVSVSGRYVS DSPEAVLNAT
LSGLGISCLP VRLAAEAITT NVLVEVFPEW KYVGTLQGMA WILHQPGRHV SQKVKVMVDY
LVGELRRTGG VDGWITQPTL LERIRN
|
|---|
| |