Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0903 |
Symbol | |
ID | 5191437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1028350 |
End bp | 1029429 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640585362 |
Product | extracellular solute-binding protein |
Protein accession | YP_001266249 |
Protein GI | 148546147 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.551806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.354887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCT TCCTCCTCGC CCCCCTGATG CTGGCCGCCA GCGTGGCCAG CGCCGCTGAA ACGGTGAAGA TCTACAACTG GTCCAGCTAC GTGGCCCCCG ATACGTTGAA GAACTTCCAG CAAGCCAGCG GCATCGTGCC GACCTATGAC GTGTACGACA GCAATGAAAC CCTCGATGGC AAGTTGATGA CCGGCAATTC CGGCTACGAC GTGGTGTTCC CCTCCAACCA TTTCATGGCC CGGCAGATCC AGGGCAAGGC CTTGAAGCGC CTGGACAAAT CCCAGCTGCC TAACTGGCAC AACCTCAACC CGGTGCTGCT CAAGGCGCTG GAGGTGAACG ACCCGGGCAA CCAGTACGGC TTCCCGTACC TGTGGGGCAG TACCGGTATT GGCTACAACA TCGACAAGGT CAAGGCGGTG CTCGGCGACA ACGCGCCCGT GGACTCCTGG GACCTGATCT TCAAGCCCGA GTACATGAGC AAGCTGAAAA GCTGTGGCGT CGCGGTGCTG GACAATGGCC CCGAACTGCT GCCGATCGCC CTGCACTACC TGGGCTTGCC CCATCACAGC CAAGACCCCA AGGACTACGA GAAGGCCAAG GACCTGCTGA TGAAAGTGCG GCCTTACATC AGCTATTTCC ACTCGTCCAA GTACACGGGC GACCTGGCCA ACGGCGATAT CTGCGTGGTA GTGGGGTTCT CAGGGGACGT GCTGCAGGCG AAGAACCGCG CCGATGAGGC GAACAATGGC GTGAAGGTGG GCTATTCGAT ACCCAAGGAG GGCGCGCCGA TGTGGTTCGA CATGGTCGCC ATGCCCGTCG ATGCGCCGGA TGAAAAGGCC GGATATGCCT ACATGAACTA CCTGCTGCAG CCGGAGGTGA TGGCCAACAT CAGCAACCAC GTCCAGTACG CCAACGGCAA CCTCAAGGCG GACGGGTTGG TGGACCCGGC GATGAAGGGT AATACGATGA TTTACCCGAG CGACGAGGTG ATGGGCAAGC TGTATGCGCT GGAGGCGATG CCGGCGAAGA TCGACCGTAT TCGTACGCGA ATCTGGACCA GTATCAAAGC CGGAAATTGA
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Protein sequence | MRTFLLAPLM LAASVASAAE TVKIYNWSSY VAPDTLKNFQ QASGIVPTYD VYDSNETLDG KLMTGNSGYD VVFPSNHFMA RQIQGKALKR LDKSQLPNWH NLNPVLLKAL EVNDPGNQYG FPYLWGSTGI GYNIDKVKAV LGDNAPVDSW DLIFKPEYMS KLKSCGVAVL DNGPELLPIA LHYLGLPHHS QDPKDYEKAK DLLMKVRPYI SYFHSSKYTG DLANGDICVV VGFSGDVLQA KNRADEANNG VKVGYSIPKE GAPMWFDMVA MPVDAPDEKA GYAYMNYLLQ PEVMANISNH VQYANGNLKA DGLVDPAMKG NTMIYPSDEV MGKLYALEAM PAKIDRIRTR IWTSIKAGN
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