| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0902 |
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| Symbol | prfC |
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| ID | 5191436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1026594 |
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| End bp | 1028219 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585361 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001266248 |
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| Protein GI | 148546146 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.779467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.296207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACTGC CCCTTTCAAA TCCCCCAGTC AGGCGATTTC CCATGACCAA CCAGGCCGCC
GAAGTCGCGA AGCGCCGCAC TTTCGCAATC ATTTCCCACC CCGACGCCGG TAAGACCACC
ATCACCGAGA AGCTGCTGTT GATGGGCAAG GCCATTGCCG TCGCCGGTAC CGTGAAGTCG
CGCAAGTCCG ACCGCCACGC CACCTCCGAC TGGATGGAAA TGGAGAAGCA GCGCGGCATC
TCCATCACCA CCTCGGTGAT GCAGTTCCCG TACCGCGAGC ACATGATCAA CCTGCTCGAC
ACCCCCGGCC ACGAAGACTT CTCGGAAGAC ACCTACCGCA CCCTGACCGC GGTGGACTCG
GCGCTGATGG TGCTCGACGG CGGTAAAGGT GTAGAGCCGC GTACCATCGC CCTGATGGAC
GTGTGCCGCC TGCGCGACAC GCCCATCGTC AGCTTCATCA ACAAACTCGA CCGAGACATC
CGCGACCCGA TCGAACTGCT CGACGAGATC GAAGCCGTTT TGAAGATCAA GGCCGCGCCA
ATCACCTGGC CGATCGGTTG CTACCGCGAC TTCAAGGGCG TGTACCACCT GACCGGTGAC
TACATCGTGG TGTACACCCC GGGCCACGGC CACGAGCGCA CCGAAGCCAA GATCATCCAG
AAGCTGGACT CGGACGAAGC CCGCGCGCAC CTGGGCGACC AGTACGATTC GTTCGTCGAG
CAACTGGAGC TGGTGCAGGG CGCTTGCCAC GAGTTCAACC AGGAAGAGTT CATCAACGGT
CAGCTGACCC CGGTGTTCTT CGGTACTGCG CTGGGCAACT TCGGTGTCGA CCACGTGCTC
GACGCCGTGG TCGACTGGGC GCCGCGTCCG CTTGGCCGTG TGGCCCACGA GCGCACCGTG
GAGCCTGTGG AAGAGAAGTT CACCGGCTTC GTGTTCAAGA TCCAGGCGAA CATGGACCCG
AAACACCGCG ACCGTATCGC CTTCATGCGC ATCTGCTCGG GCAAGTACGA GAAGGGCATG
AAAATGCGCC ACGTGCGCTT GAACAAAGAC CTGCGTATCG GCGATGCGCT GACGTTCTTC
TCCTCCGAGC GTGAGCAGCT GGAAGAAGCC TTTGCCGGTG ACATCATCGG CCTGCACAAC
CACGGCACCA TCCAGATCGG CGACACCTTC ACCGAAGGCG AGGCGCTGGG CTTCACCGGT
ATTCCGCACT TCGCGCCGGA GCTGTTCCGC CGCGTCCGCC TGAAAGACCC GCTGAAATCC
AAGCAACTGC GTCAAGGCCT GCAGCAGCTG GCCGAAGAAG GTGCTACTCA GGTGTTCTTC
CCTGAGCGCA GCAACGACAT CATCTTGGGT GCGGTCGGTG TGCTGCAGTT CGACGTGGTC
GCCAGCCGCC TGAAGGAAGA GTACAAGGTC GAGTGCGCCT ACGAGCCTAT CACCGTCTGG
TCGGCGCGCT GGATCAGCTG CGATGACAAG AAGAAGCTCG AGGAATTCCA GACCAAGGCC
ATGGAAAACC TGGCCATCGA CGGCGGCGGT CACCTGACCT ACCTGGCGCC GACCCGGGTC
AACCTGGCGC TGATGGAAGA GCGCTGGCCG GACATCAAGT TCCGCGCTAC CCGCGAGCAC
CATTAA
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| Protein sequence | MILPLSNPPV RRFPMTNQAA EVAKRRTFAI ISHPDAGKTT ITEKLLLMGK AIAVAGTVKS
RKSDRHATSD WMEMEKQRGI SITTSVMQFP YREHMINLLD TPGHEDFSED TYRTLTAVDS
ALMVLDGGKG VEPRTIALMD VCRLRDTPIV SFINKLDRDI RDPIELLDEI EAVLKIKAAP
ITWPIGCYRD FKGVYHLTGD YIVVYTPGHG HERTEAKIIQ KLDSDEARAH LGDQYDSFVE
QLELVQGACH EFNQEEFING QLTPVFFGTA LGNFGVDHVL DAVVDWAPRP LGRVAHERTV
EPVEEKFTGF VFKIQANMDP KHRDRIAFMR ICSGKYEKGM KMRHVRLNKD LRIGDALTFF
SSEREQLEEA FAGDIIGLHN HGTIQIGDTF TEGEALGFTG IPHFAPELFR RVRLKDPLKS
KQLRQGLQQL AEEGATQVFF PERSNDIILG AVGVLQFDVV ASRLKEEYKV ECAYEPITVW
SARWISCDDK KKLEEFQTKA MENLAIDGGG HLTYLAPTRV NLALMEERWP DIKFRATREH
H
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