| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0900 |
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| Symbol | |
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| ID | 5193424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1024440 |
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| End bp | 1025351 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585359 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001266246 |
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| Protein GI | 148546144 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.250689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA GAATCGCCTT GCTGCTGGGC GCGGCCCTGC TGTTCGCAGG AGTTGCCCAG
GCAGCGGAAA AACCCCTGGT GCGCATCGGC GCGCGGGTGT TCACCGAACA GACCGTGCTC
GCCGAAATCA CCGCGCAGTA CCTGCGCGCC AACGGCTTTG ACGTACGCGT CACCACCGGC
CTTGGCAGCA GCATCGCTCG CCAGGCCCAG GAAACCGGCC AGCTCGACCT GATGTGGGAA
TACACCGGGG TGTCGCTGGT GTCCTACAAC CACATCGATG AGCGTATGCC TAGTGCCGAG
GCCACCTACG CCAAGGTCAA GGAGCTGGAT GCCAAAAAAG ACCTGATCTG GCTGACCCCG
TCGAAATTCA GCAACACCTA TGCCCTCGGC TTGCCGAAGC AGGTCGCCGA GGCCTACCCG
CAGATCAACT CGATCAGCGA CCTCAACCAG GTGCTGCGCG ACGAGCGCAA GCGTAACCAC
CTGGTGGCTC TGGACACCGA GTTCGCCAAC CGCCCCGACG GCCTGGTCGG GCTCAAGGAA
ATGTACGACC TGCAGGTCGG CCGCGCCAAC ATCCGCCAGA TGGACGCGGG CCTGGTCTAC
ACGGCCATGC ACAACAACCA GGTGTTCGCA GGCCTGGTCT ACACCACCGA CGGTCGCCTG
AGCGCGTTCA ACCTCAAGCT GCTCGAAGAC GACAAGCACT ACTTCCCCGA CTACACCGCC
GCCCCGGTGG TGCGCAAGGC CGTGCTCGAC GCCAACCCGC AACTGGTCGC CCTGCTCAAG
CCACTGGCCG AGCAGCTCGA TGACGAGACC ATGCGCCAGC TCAATGCCAA GGTTGACGTA
GACCACCAGA ACCCGACCGC TGTGGCCGCC GCATTCCTGC GAGAGCATCC CCTCAAGGAG
GTACAGCCAT GA
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| Protein sequence | MKKRIALLLG AALLFAGVAQ AAEKPLVRIG ARVFTEQTVL AEITAQYLRA NGFDVRVTTG
LGSSIARQAQ ETGQLDLMWE YTGVSLVSYN HIDERMPSAE ATYAKVKELD AKKDLIWLTP
SKFSNTYALG LPKQVAEAYP QINSISDLNQ VLRDERKRNH LVALDTEFAN RPDGLVGLKE
MYDLQVGRAN IRQMDAGLVY TAMHNNQVFA GLVYTTDGRL SAFNLKLLED DKHYFPDYTA
APVVRKAVLD ANPQLVALLK PLAEQLDDET MRQLNAKVDV DHQNPTAVAA AFLREHPLKE
VQP
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