| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0898 |
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| Symbol | |
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| ID | 5191113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1022636 |
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| End bp | 1023793 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585357 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001266244 |
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| Protein GI | 148546142 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.706016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.516388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAC TGAAGAACCT CAGCAAAACC TTCAACGTCA ACGGCAAGGA CGTCAAAGCC
GTCGACTCGG TAAGCCTCAC CGTCAATGAA GGGGAAATCT GCGTGTTCCT CGGCCCGTCG
GGCTGCGGCA AGAGCACCAC GCTGAAAATG ATCAACCGCC TGATCACGCC CACCTCGGGC
CAGGTGTTCA TCAACGGCGA AGACACCACC GGCCTGGACG AAGTTACCCT GCGCCGGCAC
ATCGGCTATG TGATTCAGCA GATCGGTCTG TTCCCCAACA TGACCATCGA GGAGAACATT
ACCGTGGTCC CGCGCCTGCT TGGCTGGGAC AAGCAGAAAT GCCACGAGCG GGCTCGCGAG
CTGATGCACA TGATCAAGCT CGAACCCAAG CAGTACCTGC AACGCTACCC GCGCGAGCTA
TCTGGCGGCC AGCAACAGCG TATCGGCGTG ATTCGCGCCC TGGCAGCAGA TGCACCCGTG
CTGTTGATGG ACGAGCCATT TGGCGCGGTC GACCCGATCA ACCGCGAGAT GATCCAGAAC
GAATTCTTCG AAATGCAGCG GGCGCTGAAC AAGACGGTAA TCATGGTCAG CCACGACATC
GACGAAGCGA TCAAACTGGG CGACAAGATT GCCATCTTCC GTGCCGGCAA GCTGTTGCAG
CTGGATCACC CGGATACCCT GTTGGCGCAC CCGGCGGATG ATTTCGTCAG CAACTTTGTG
GGCCAGGACA GCACCCTCAA ACGCCTGTTG CTGGTGCGTG CCGAGGATGC AGCGGACAAC
GCGCCGTCGG TGAGCCCGGA AACACCGGTG GGCGACGCGC TGGAGCTGCT CGATGAGCAC
GACCGCCGCT ACGTGGTGGT GACCGATGCG CAGAACAAGG CGCTGGGCTA TGTGCGCCGG
CGCGACATGC ACCGCCAGCA AGGCACTTGC GGTGATTTCC TGCGGCCGTT CAATGCCACG
GCCTCGTACG ATGAGCACTT GCGCATCCTG CTGTCGCGCA TGTACGAGTT CAACCGCGCG
TGGTTGCCAG TGTTGGATGC CGAGCAGGTG TTCTTGGGCG AGGTGACGCA GGAGTCGATT
GCCGCGTACC TGAGCTCGGG GAGATCGCGG GGGGCGAAGA GCAGTATCGT TTCGCCGGCC
GAGGCGGTGG TTTCGTAA
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| Protein sequence | MIELKNLSKT FNVNGKDVKA VDSVSLTVNE GEICVFLGPS GCGKSTTLKM INRLITPTSG
QVFINGEDTT GLDEVTLRRH IGYVIQQIGL FPNMTIEENI TVVPRLLGWD KQKCHERARE
LMHMIKLEPK QYLQRYPREL SGGQQQRIGV IRALAADAPV LLMDEPFGAV DPINREMIQN
EFFEMQRALN KTVIMVSHDI DEAIKLGDKI AIFRAGKLLQ LDHPDTLLAH PADDFVSNFV
GQDSTLKRLL LVRAEDAADN APSVSPETPV GDALELLDEH DRRYVVVTDA QNKALGYVRR
RDMHRQQGTC GDFLRPFNAT ASYDEHLRIL LSRMYEFNRA WLPVLDAEQV FLGEVTQESI
AAYLSSGRSR GAKSSIVSPA EAVVS
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