| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0897 |
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| Symbol | |
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| ID | 5191112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1020040 |
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| End bp | 1022469 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585356 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001266243 |
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| Protein GI | 148546141 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.448435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.28892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACA ACAAACCTCT CCCACGCTTT CGCGCCCTGG CGCTGGCCCT GGCGGTCAGT
ACTGTGGCCG TTGGCAGCCA GGCCGCAGAG GCCGCTAATG CCCTCCACAT CCAGGCCCAG
CCATTGGGTT CGGCGCTGAA CCAGCTCGGC CAGCAAACCA GCCTGCAGCT GTTTTTCAGC
CCCGAGCTGG TCGCCGGCAA ACAGGCCCCG GCGGTATCGG GCAACCTGGC GCCGGTGCAG
GCGCTGCAAC AGCTGTTGCA AGGCAGCGGG CTCACCTACG AGATGTCCGG GGACACCGTT
GTGGTGAAGC CTCTGCCGAC TACCCTTGAC CTGGGCAGCG GCAGCCTGGA GCTGGCCCCC
ACCGACATCA AGGTGGTCGG TGACTGGCTG GGTGATGCCC AGCAGAGCGT GGTACAGAAC
CACCCTGGGG CACGCACCGT GGTACGCCGC GAGGCAATGG TGGAGAAGGG CGCAATGAAC
GTGCGCGACG TGCTGCGCGG CATCCCCGGC GTGCAAGTGC AGGACTCCAA CGGGACCGGT
GGCAGCGACC TGTCGCTGAA CGTGGGCGTA CGCGGCCTTA CTTCGCGCCT GTCGCCGCGC
TCCACGGTAC TGATCGATGG CATCCCGGCC GCCTTCGCGC CGTATGGCCA GCCACAGCTG
TCGATGGCAC CGATTTCTTC TGGCAACCTC GACAGCATCG ACGTCGTGCG CGGTGCCGGC
TCGGTGCGCT ATGGCCCGCA GAACGTGGGC GGCGTGATCA ACTTTGTAAC CCGGGCGATT
CCGGAAAAGG CCTCGGCAGA GCTGTCCACC ACCCTGGAGA CCTCCCAGCA CGGTGGCTGG
AAACATACCG AGTCAGCCTT CGTCGGTGGC ACGGCCGACA ATGGCATGGG CGTGGCGCTG
CTGTACACCG GGGTGAATGG CAACGGTTAC CGTGAAAGCA ACAACGGCAA CGACATCGAC
GACGTAATCC TCAAGACGCA TTGGGCGCCA ACCGATGTTG ATGAGTTCTG GCTGAACTTC
CATTATTACG ATGGCCGTGC CGACATGCCG GGTGGCCTGA CCCAGGCCCA ATACGACAGC
AACCCGTACC AGTCGCTGCG CGATTACGAC TACTTCGCGG GCCGGCGCAA GGATGTGTCG
TTCAAATGGC AGCGGCAGCT CGACGATGCC ACCCAGTTCG AAGTGCTGAC CTACTACACC
GACAGCTTCC GCGGCAGCAC CATCGCCTCG CGGGACATGA AGACGTTGTC GTCGTACCCG
CGCAACTACC ACACCTTTGC CATCGAACCC CGTGTGTCGC GCATCTTCTT TGCCGGCCCA
ACCACCCAGG AAGTCAGTGT CGGGTACCGT TACCTGAAGG AAGCGATGCG TGAACAATCG
ACTCGCCTGG CGCTGATCGA CAACGTGCCG ACGGTGACCC CGACTTCCGA CGGCCACGTG
TTCCAGGACC GCAGTGGCGG CACCGAGGCC AGCGCCTACT ACATCGACGA CAAGATCGAC
GTGGGCAACT GGACCATCAC CCCTGGCGTG CGCTTCGAGC ACATCAATAC CGACTGGCGC
GACCGCCCGG TGCTGGACGC CAACAACCGC CCGGTAGCCG AGAAGAAGCG CAGCATCACC
AGCGACGAGC CTTTGCCGGC ACTGAGCGTG ATGTACCACG TTTCCGATGC CTGGAAGGTG
TTCGCCAACT ACGAGACTTC GTTCGGTAGC CTGCAGTACT TCCAGCTGGG CCAGGGCGGT
TCTGGCAACA GTACGGCCAA TGGCCTGGAG CCGGAAAAAG CCAAGACCTA CGAAATCGGT
ACCCGTTATG ACAATGGCGG CTTTGCCGGT GAGCTGACGG CGTTCTACAT CGACTTTGAT
GATGAGCTGC AGTACATCAG CAACGACGTG GGCTGGACCA ACCTCGGTGC GACCAAGCAC
CAGGGCATCG AGGCTTCGGT GCGTTATGAC CTGGCCGGGC TGGACCCGCG CCTGGACGGG
CTGTCGGTGA GCGGTGGCTA CACCTATACC CGCGCGACCT ATGAAGGGGA TATCCCAGGG
TTCAAGGGCC GAGACCTGCC GTTCTATTCA CGCCAGGTGG CCACTGCCGG GGTGCGTTAC
GCAGTTAACC GCTGGACCTG GAACCTGGAC GCCTATGCCC AATCGAAGCA GCGTGCGCCG
GGAACCGGGA TCAATGCCGA TGGCAGTTTC AATGGCGACT ACATCACCGA GCCGAGTGCT
GACGGGCAGT ATGGCGATAT TCCGGGTTAT GTGACCTGGC ATGCCCGCGG TGGGTACGAA
TTCGGGCCTG AACTGTCCAA CCTGAAGCTG GCGGCGGGGG TGAAGAACCT GTTCGACAAG
CAGTACTTCA CCCGCTCCAG TGACAACAAT GCCGGCCTTT ACGTGGGTGA GCCGCGAACC
TTCTACGTGC AGGCCAGTGT TGGGTTTTGA
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| Protein sequence | MNNNKPLPRF RALALALAVS TVAVGSQAAE AANALHIQAQ PLGSALNQLG QQTSLQLFFS
PELVAGKQAP AVSGNLAPVQ ALQQLLQGSG LTYEMSGDTV VVKPLPTTLD LGSGSLELAP
TDIKVVGDWL GDAQQSVVQN HPGARTVVRR EAMVEKGAMN VRDVLRGIPG VQVQDSNGTG
GSDLSLNVGV RGLTSRLSPR STVLIDGIPA AFAPYGQPQL SMAPISSGNL DSIDVVRGAG
SVRYGPQNVG GVINFVTRAI PEKASAELST TLETSQHGGW KHTESAFVGG TADNGMGVAL
LYTGVNGNGY RESNNGNDID DVILKTHWAP TDVDEFWLNF HYYDGRADMP GGLTQAQYDS
NPYQSLRDYD YFAGRRKDVS FKWQRQLDDA TQFEVLTYYT DSFRGSTIAS RDMKTLSSYP
RNYHTFAIEP RVSRIFFAGP TTQEVSVGYR YLKEAMREQS TRLALIDNVP TVTPTSDGHV
FQDRSGGTEA SAYYIDDKID VGNWTITPGV RFEHINTDWR DRPVLDANNR PVAEKKRSIT
SDEPLPALSV MYHVSDAWKV FANYETSFGS LQYFQLGQGG SGNSTANGLE PEKAKTYEIG
TRYDNGGFAG ELTAFYIDFD DELQYISNDV GWTNLGATKH QGIEASVRYD LAGLDPRLDG
LSVSGGYTYT RATYEGDIPG FKGRDLPFYS RQVATAGVRY AVNRWTWNLD AYAQSKQRAP
GTGINADGSF NGDYITEPSA DGQYGDIPGY VTWHARGGYE FGPELSNLKL AAGVKNLFDK
QYFTRSSDNN AGLYVGEPRT FYVQASVGF
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