| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0888 |
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| Symbol | |
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| ID | 5193798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1007677 |
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| End bp | 1008825 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585347 |
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| Product | putative aminotransferase |
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| Protein accession | YP_001266234 |
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| Protein GI | 148546132 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.533677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA GCAAACTGCC GAATGTCGGC ACGACCATCT TCACCACCAT GTCCCAGCTC
GCCGTGCAGA CTGGCGCGCT CAACCTGTCC CAGGGCTTTC CTGACTTCAA TGGCCCGCAG
GCCCTGCTCG ATGCAGTGGG CCGGCACGTG GCTGCCGGGC ATAACCAGTA TTCGCCGATG
ACCGGCCTTC CGGCTTTGCG CCAGCAGGTA GCGGCCAAGG TCGAGCGGCT GTATGGGGCC
AGGGTGGATG CCGATCAGGA AGTGACTATC ACCCCCGGCG CCACCGAGGC TATTTTCTGT
GCCATCCAGG CGGTGGTGCA TGCCGGTGAC GAAGTGATCG TCTTTGACCC CTGCTACGAC
AGTTACGAGC CGTCCGTGGA GCTGGCCGGT GGTCGCTGTG TACATGTGCA GTTGAGCGAC
GGCGATTTCC GTATCGACTG GCAGAAATTC AGCGATGCTT TGAGCCCGCG CACGCGCATG
GTCATCCTCA ACTCGCCACA CAACCCCAGC GGCGCGTTGA TCACCCGCGA AGACCTCGAC
CAGTTGGCCG CACTTATTGC CGACCGCGAT ATCTACCTGG TCAGCGATGA AGTGTACGAG
CACCTGGTCT ACGACGGTGT ACGCCACGCC AGTGTGCTGG CCCATGAGCA GTTGTACTCG
CGTGCCTTCG TGGTTAGTTC CTTCGGCAAG ACGTACCACG TTACCGGCTG GAAGACCGGT
TACGTGATCG CGCCGCCTGC CCTGAGCGCC GAGCTGCGCA AAGTGCACCA GTACGTCAAT
TTCTGTGGCG TGACGCCGCT GCAGTGTGCC TTGGCCGACT TCATGGCCGG GCACCCCGAG
CATATTGATG AGTTGCCAGC CTTTTACCAG GCTAAGCGCG ATCTGTTTTG CGGTTTGCTG
GACGGCTCGC GTTTTAACTT TACCCGCACG ACGGGCACTT ATTTCCAGTT GGTGGACTAT
TCGCAAATCC GCCCGGACCT GAACGATGTC GACATGTCGC TGTGGCTTAC CCGCGAACAT
GGCGTGGCAA CCATTCCGGT ATCGGTGTTC TACCAGCAAC CCATCCCCGA GCAACGCCTG
GTACGCCTGT GCTTTGCCAA ACGAGAGGAG ACGCTGCGTC AGGCAGCGGA AAGACTATGC
GCGATCTGA
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| Protein sequence | MIRSKLPNVG TTIFTTMSQL AVQTGALNLS QGFPDFNGPQ ALLDAVGRHV AAGHNQYSPM
TGLPALRQQV AAKVERLYGA RVDADQEVTI TPGATEAIFC AIQAVVHAGD EVIVFDPCYD
SYEPSVELAG GRCVHVQLSD GDFRIDWQKF SDALSPRTRM VILNSPHNPS GALITREDLD
QLAALIADRD IYLVSDEVYE HLVYDGVRHA SVLAHEQLYS RAFVVSSFGK TYHVTGWKTG
YVIAPPALSA ELRKVHQYVN FCGVTPLQCA LADFMAGHPE HIDELPAFYQ AKRDLFCGLL
DGSRFNFTRT TGTYFQLVDY SQIRPDLNDV DMSLWLTREH GVATIPVSVF YQQPIPEQRL
VRLCFAKREE TLRQAAERLC AI
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