Gene Pput_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0887 
SymbolengA 
ID5193797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1006062 
End bp1007525 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content61% 
IMG OID640585346 
ProductGTP-binding protein EngA 
Protein accessionYP_001266233 
Protein GI148546131 
COG category[R] General function prediction only 
COG ID[COG1160] Predicted GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.283319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCCG TAATTGCCCT GGTGGGCCGC CCGAACGTCG GCAAATCCAC CATGTTCAAC 
CGCCTGACCA AGACCCGCGA TGCCATCGTC GGTGACCTGT CGGGCCTGAC CCGTGACCGC
CAGTATGGTG ATGCCAGCTG GCAGGGTCGT TCCTTCATCC TGATTGACAC CGGTGGTATC
ACCGGTGACG AAGTGGGCAT GGACGAAAAA ATGGCCGAGC AGTCGCTCAT GGCCATCGAA
GAAGCCGACT ACGTGCTGTT CCTGGTTGAT GCCCGAGCGG GCATGACCGC AGCAGACCAG
ATGATCGCCG AGCACCTGCG CAAGCGGAAC AAGGCCGCGA TCCTGGTTGC CAACAAGATC
GACAACATCG ACCCCGACGT TGCCCGCGCC GAATTCTCGC CAATGGGCAT GGGCAACGCC
ATTCCGGTGG CAGGCTCCCA GGGCCGGGGT ATCAGCGCCT TGATGGAGGC CGTGCTCGGT
CACCTGCCGC GTGATGCCGA AGACGAAGCC CTCGAACAGG ACGTTGCTGA AGGTGAGGAA
GCCGTGCGCA TTCCTGGCCC AAGCGAGAAG GATGGCATCA AGATCGCCAT CATCGGCCGC
CCGAACGTTG GCAAGTCGAC GCTGGTCAAC CGCATGCTCG GCGAAGAGCG TGTGGTGGTC
TACGACGAGC CGGGTACTAC CCGTGACAGT ATCTACATCC CGTTCGAGCG TGATGGTGAC
AAGTACACCT TCATCGACAC CGCCGGTGTG CGCAAGCGTG GCAAGATCCA CGAGGAAGTC
GAGAAGTTCT CGGTGGTGAA GACGCTGCAG GCAATCAAGG ACGCCAACGT CGTCATCTTC
GTCATGGATG CCCGCGAAGG TGTGGTCGAC CATGACCTGA ACCTGCTGGG CTTTGCCCTT
GAAGCCGGTC GCGCCATCGT CATTGCCCTG AACAAGTGGG ATGGCATGGA GCCGGGTGAG
CGCGCCTACG TGAAGACCGA GCTGGAGCGT CGGCTGTTCT TCGTCGATTT TGCCGACATC
CACTTCATTT CTGCGCTGCA TGGCACGGGC GTGGGCAACT TGTACAAGTC GGTGCAGGCT
GCGTTCCAGT CCGCGGTCAC CCGCTGGCCG ACCAGCCGCC TGACGCAGAT CCTCGAAGAT
GCCGTGAGCG AGCACCAGCC GCCGATGGTC AATGGTCGCC GCATCAAGCT GCGCTATGCC
CACCTCGGCG GTGCCAACCC GCCGCTCATC GTGATCCACG GCAACCAGAC CGACAGCATT
CCCAAGTCGT ACTCGCGTTA CCTGGAAAAC ACCTATCGCC GGGTGCTCAA ACTGGTCGGT
ACGCCGATTC GTATTGAGTA CAAGGGCGGC GAGAACCCGT ACGAGGGTAA GAAGAACACC
CTTACCGATC GCCAGGTCAA CAAGAAACGC CGCCTGATGT CGCACCACAA GAAGGCCGAG
AAGAAGCGTC GCGACAAACG CTAA
 
Protein sequence
MVPVIALVGR PNVGKSTMFN RLTKTRDAIV GDLSGLTRDR QYGDASWQGR SFILIDTGGI 
TGDEVGMDEK MAEQSLMAIE EADYVLFLVD ARAGMTAADQ MIAEHLRKRN KAAILVANKI
DNIDPDVARA EFSPMGMGNA IPVAGSQGRG ISALMEAVLG HLPRDAEDEA LEQDVAEGEE
AVRIPGPSEK DGIKIAIIGR PNVGKSTLVN RMLGEERVVV YDEPGTTRDS IYIPFERDGD
KYTFIDTAGV RKRGKIHEEV EKFSVVKTLQ AIKDANVVIF VMDAREGVVD HDLNLLGFAL
EAGRAIVIAL NKWDGMEPGE RAYVKTELER RLFFVDFADI HFISALHGTG VGNLYKSVQA
AFQSAVTRWP TSRLTQILED AVSEHQPPMV NGRRIKLRYA HLGGANPPLI VIHGNQTDSI
PKSYSRYLEN TYRRVLKLVG TPIRIEYKGG ENPYEGKKNT LTDRQVNKKR RLMSHHKKAE
KKRRDKR