| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0882 |
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| Symbol | |
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| ID | 5191131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1000671 |
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| End bp | 1001693 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585341 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001266228 |
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| Protein GI | 148546126 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.703197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.55186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG CGCACCCCGA AGTAGCAGTA GCGCCTGGCC AGAACCCCGG TGAGCTTTTG
CGCCTGGCCC GTGAGAAACG GGACTGGTCT CAAGCCGAGG TGGCCCGCAA GCTCAACCTC
ACTGTCAGTT CGTTGAACCA CGTGGAAACC GGCGCCTTCG ACAAGCTGCC CGGGCATACT
TTCGCTCGTG GCTACATTCG TGCCTACGCC AAGCTGATGG ACCTCGACCA GGCCGCCCTG
GTAGACGCCT TCGACCGTTA CACCGGTACC CACGCCAAAG GCAGCGACGT GCATTCGCTG
GGCCGTATCG AAGAGCCTGT GCGTCTGTCG CACAACATCC TGCGCGGCGT CAGCCTGCTG
TTGCTGGTGG CTGTGGTCGG TGGTGGCTTT TTCTGGTGGC AGGACCAGGG CAGCCTGCGG
GGCAAGGACC TGGCCAAGAT TGCCCTGGAG CATGTCGAGG TCGAAAGCGC CGACGGCACC
ACACAGATTC ACCCGCTCGA TGAGCCTGAA GACCAGGCCG TTTCCGCTGG CCAGCAAGCT
GAAAGCTCGC CGCTGGCGCT GGAACAGGGC GCTGCCGAGC AGCCTGCTGC CGCTGAGCAG
GCGCCGGTAA GCTCTGAGGC AACCATTGCC GCAGCGCCTG CTCCAGCACA GCAAGCCCCG
GTGCAACCCG CACCTGCGGC TTCGCCTGCA CCGGTTACGC CTCCGGTACA GGCCACTGCT
GCACCTGCAC CTGCACCTGC ACCGGCCGTG GCGGCCACCG AGCCTGCCGC AGTGCCAGCT
GGCAGCGCCA AGGTCGCCAT CCAGTTCACC GCCGATTGCT GGACCCAGGT CAGCGACGGC
AACGGCAAGG TGCTGTTCAG CGCCATCAAG CGCAAGGGGG ACAACCTCGA GCTGACCGGC
AAGCCGCCAT TCGCGGTACG CCTGGGCTTT GCCCGGGGCG CCCAGGTCAG CTACAACGGC
CAGGCCGTCG ATGTTGCCCC GTTCACCAGT GGCGAGACTG CTCGCCTGAA GTTGGGACAG
TAA
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| Protein sequence | MNAAHPEVAV APGQNPGELL RLAREKRDWS QAEVARKLNL TVSSLNHVET GAFDKLPGHT
FARGYIRAYA KLMDLDQAAL VDAFDRYTGT HAKGSDVHSL GRIEEPVRLS HNILRGVSLL
LLVAVVGGGF FWWQDQGSLR GKDLAKIALE HVEVESADGT TQIHPLDEPE DQAVSAGQQA
ESSPLALEQG AAEQPAAAEQ APVSSEATIA AAPAPAQQAP VQPAPAASPA PVTPPVQATA
APAPAPAPAV AATEPAAVPA GSAKVAIQFT ADCWTQVSDG NGKVLFSAIK RKGDNLELTG
KPPFAVRLGF ARGAQVSYNG QAVDVAPFTS GETARLKLGQ
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