Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0880 |
Symbol | |
ID | 5193449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 998753 |
End bp | 999898 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640585339 |
Product | radical SAM protein |
Protein accession | YP_001266226 |
Protein GI | 148546124 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.588351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.297118 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAT CTACTGGCAA AATCAACCTG TTGGGTCTGA CCCAGCCGGA AATGGAACAA TTCTTCGACT CTATCGGGGA GAAGCGCTTC CGTGCCGGCC AGGTGATGAA ATGGATTCAC CATTTTGGCG TGTCCGACTT TGCGGCCATG ACCAACGTAG GCAAGGTCTT GCGCGAAAAG CTCGAGGCCG TTGCCGAAAT ACGCCCACCG GAAGTGGTCA GTGAAGACAT TTCCGCCGAC GGCACCCGTA AATGGGTGAT CCGCGTTGCC TCCGGCAGCT GCGTCGAGAC CGTCTATATT CCAACCGACG ACCGCGGCAC CCTGTGCGTA TCGTCGCAAG CCGGCTGTGC CCTGGACTGC AGCTTCTGCT CCACCGGCAA GCAAGGCTTC AACAGCAACC TCACTGCCGC CGAAGTGATC GGCCAGGTGT GGCTTGCCAA CAAATCCTTC GGGACCGTTC CTGCCAAAGT CGACCGCGCG ATTACCAACG TGGTCATGAT GGGCATGGGC GAGCCCTTGC TGAACTTCGA CAACGTCATT GCCGCCATGA AAATCATGAT GGATGACCTT GGCTATGGCA TTTCCAAGCG CCGTGTCACC TTGTCCACCT CGGGCGTGGT GCCGATGATC GACGAGCTGG CCAAGCACAT CGACGTGTCG CTGGCCCTGT CGCTGCATGC GCCGAACGAC GAACTGCGCA ACAAGCTGGT ACCGATCAAC AAGAAGTACC CGCTGAAAGT GCTGCTGGAA TCGTGCATGG GCTACATGTC CACCCTGGGT GGCAAGCGCG TGCTCACCGT CGAGTACACC CTGCTCAAGG ACGTCAACGA CCAGCCCGAG CATGCCGCGC AGATGATCGA ACTGTTGCGC GATGTACCCT GCAAGATCAA CCTGATCCCG TTCAACCCGT TCCCGCATTC GGGCTACGAG CGACCGAGCA ACAACGCTAT TCGTCGCTTC CAGGACCTGC TGCACCACGG TGGCTTCAAC GTCACCACCC GTACCACGCG CGGCGACGAC ATCGACGCTG CCTGTGGCCA GCTGGTGGGC CAGGTCAATG ACCGTACTCG CCGCAGTGAG CGCTACATCG CTGTTCGCCA GCTTTCTGCG GACGTCGAAC TGCCAGACAG CGCCGCCAGC CACTGA
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Protein sequence | MTTSTGKINL LGLTQPEMEQ FFDSIGEKRF RAGQVMKWIH HFGVSDFAAM TNVGKVLREK LEAVAEIRPP EVVSEDISAD GTRKWVIRVA SGSCVETVYI PTDDRGTLCV SSQAGCALDC SFCSTGKQGF NSNLTAAEVI GQVWLANKSF GTVPAKVDRA ITNVVMMGMG EPLLNFDNVI AAMKIMMDDL GYGISKRRVT LSTSGVVPMI DELAKHIDVS LALSLHAPND ELRNKLVPIN KKYPLKVLLE SCMGYMSTLG GKRVLTVEYT LLKDVNDQPE HAAQMIELLR DVPCKINLIP FNPFPHSGYE RPSNNAIRRF QDLLHHGGFN VTTRTTRGDD IDAACGQLVG QVNDRTRRSE RYIAVRQLSA DVELPDSAAS H
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