Gene Pput_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0875 
SymbolhscB 
ID5190270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp995227 
End bp995748 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content62% 
IMG OID640585334 
Productco-chaperone HscB 
Protein accessionYP_001266221 
Protein GI148546119 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID[TIGR00714] Fe-S protein assembly co-chaperone HscB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.346323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.325909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACTC CTTGTCATTA CGCATTGTTT GACCTCCAGC CAAGCTTCCG TCTGGATCTC 
GACAAGCTGG CCACTCGCTA TCGCGAGCTG GCCCGCGAAG TCCATCCCGA CCGCTTTGCC
GACGCCTCCG AGCGTGAGCA GCGAGTAGCG CTGGAAAAGT CCGCAGCACT CAACGACGCT
TACCAGACGC TGCGCAGTGC GCCGCGTCGC GCGCGCTACC TGCTGGCCAT CAGCGGCCAC
GAAGTGCCCC AGGAAGTCAC GGTCCACGAC CCTGACTTTC TGCTGCAGCA GATGCAGTGG
CGTGAAGAGC TCGAAGAACT GCAGGATGAA GCCGACCTTG ACGGTGTCGG CGTGTTCAAG
AAGCGCCTGA AGGCCGCCCA GGACACGCTG AATGAGGACT TTGCCGGCTG CTGGGATGCC
CCGGGCGAGC GCGACAAGGC TGAACGCCTG ATGCGCCGCA TGCAGTTCCT CGACAAGCTC
GCCCAAGAAG TGCGCCAACT GGAAGAGCGC CTCGACGATT AA
 
Protein sequence
MGTPCHYALF DLQPSFRLDL DKLATRYREL AREVHPDRFA DASEREQRVA LEKSAALNDA 
YQTLRSAPRR ARYLLAISGH EVPQEVTVHD PDFLLQQMQW REELEELQDE ADLDGVGVFK
KRLKAAQDTL NEDFAGCWDA PGERDKAERL MRRMQFLDKL AQEVRQLEER LDD