| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0874 |
|---|
| Symbol | |
|---|
| ID | 5192874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 994895 |
|---|
| End bp | 995218 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640585333 |
|---|
| Product | iron-sulfur cluster assembly protein IscA |
|---|
| Protein accession | YP_001266220 |
|---|
| Protein GI | 148546118 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0316] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.301762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATCA GCATGACAGA AGCCGCCGCC AACCACATTC GCCGCTCCCT CGACGGGCGC
GGCAAAGGTG AGGGCATTCG CCTGGGCGTG CGCACCACCG GTTGCTCGGG TCTGGCCTAC
GTGCTGGAAT TCGTCGACGA ACTGGCGGAC GAAGACCAGG TGTTCGAAAA CCATGGCGTC
AAGGTGATCA TCGATCCCAA GAGCCTGGTC TATCTCGACG GCACCGAACT GGATTTCGTC
AAGGAAGGGT TGAACGAAGG CTTCAAGTTC AACAACCCCA ACGTGCGCGG TGAGTGTGGC
TGCGGCGAAA GCTTCAACGT TTGA
|
|---|
| Protein sequence | MAISMTEAAA NHIRRSLDGR GKGEGIRLGV RTTGCSGLAY VLEFVDELAD EDQVFENHGV
KVIIDPKSLV YLDGTELDFV KEGLNEGFKF NNPNVRGECG CGESFNV
|
|---|
| |