| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0872 |
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| Symbol | |
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| ID | 5193580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 993219 |
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| End bp | 994433 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585331 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_001266218 |
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| Protein GI | 148546116 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.368262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGC CGATCTACCT TGATTACTCT GCGACCACTC CGGTCGACCC ACGCGTGGCC
CAGAAGATGG CCGACTGCCT GCTGGTCGAC GGGAACTTCG GTAACCCGGC CTCGCGCTCC
CACGTCTTTG GCTGGAAAGC CGAGGAAGCG GTGGAGAACG GTCGCCGCCA GGTTGCCGAG
CTGATCAACG CCGATCCGCG CGAAATCGTC TGGACCAGCG GTGCCACCGA GTCCGACAAC
CTCGCGCTCA AAGGTGTCGC GCACTTCTAT CAGACCAAGG GCAAGCACAT CATTACCTCC
AAGATCGAGC ACAAGGCGGT CCTGGATACC GCTCGCCAGC TGGAGCGCGA AGGTTTTGAA
GTCACTTACC TGGAGCCAGG CGAAGACGGC ATCGTCACCC CGGCCATGGT AGAAGCGGTG
CTGCGCGACG ACACCATCCT GGTCTCGCTG ATGCATGTGA ACAACGAAGT CGGCTCGATC
AACGACATTG CTGCCATCGG TGAACTGACC CGTTCGCGCG GCGTATTGTT CCATGTCGAC
GCTGCCCAGT CGGCCGGCAA GGTCGAAATC GACCTGCAAA AGCTGAAAGT CGACCTGATG
TCGTTCTCGG CGCACAAGGT CTATGGCCCG AAAGGCATCG GCGCACTGTA CGTCAGCCGC
AAGCCGCGTG TACGTCTTGA GGCCATCATT CACGGCGGCG GTCATGAGCG CGGCATGCGT
TCGGGCACCC TGCCGACCCA CCAGATCGTC GGCATGGGCG AAGCCTTCGC CATTGCCAAA
CAGGAAATGG TTGCAGAAAA CGCACGCATC AAGGCCCTGA GCGACCGCTT CTTCAAGCAG
GTCTCAAACC TTGAAGAGCT GTACGTCAAT GGCAGCCAGA CAGCACGTGT ACCGCACAAC
CTGAACCTGA GCTTCAACTA CGTCGAAGGC GAATCGCTGC TGATGTCGCT GAAAGACATC
GCCGTATCGT CCGGTTCGGC CTGTACCTCC GCGTCGCTCG AGCCGTCCTA CGTACTGCGT
GCTCTGGGCC GCAACGACGA GCTGGCGCAC AGCTCGATCC GCTTCTCCTT CGGCCGTTTC
ACCACCGAAG AAGAAGTCGA CTACGCCGCG CAGAAAGTCT GCGAGGCCGT CAACAAACTG
CGTGAGCTGT CGCCGCTGTG GGATATGTAC AAAGACGGCG TTGACATCTC CAAGATCGAG
TGGGCCGCCC ACTAA
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| Protein sequence | MKLPIYLDYS ATTPVDPRVA QKMADCLLVD GNFGNPASRS HVFGWKAEEA VENGRRQVAE
LINADPREIV WTSGATESDN LALKGVAHFY QTKGKHIITS KIEHKAVLDT ARQLEREGFE
VTYLEPGEDG IVTPAMVEAV LRDDTILVSL MHVNNEVGSI NDIAAIGELT RSRGVLFHVD
AAQSAGKVEI DLQKLKVDLM SFSAHKVYGP KGIGALYVSR KPRVRLEAII HGGGHERGMR
SGTLPTHQIV GMGEAFAIAK QEMVAENARI KALSDRFFKQ VSNLEELYVN GSQTARVPHN
LNLSFNYVEG ESLLMSLKDI AVSSGSACTS ASLEPSYVLR ALGRNDELAH SSIRFSFGRF
TTEEEVDYAA QKVCEAVNKL RELSPLWDMY KDGVDISKIE WAAH
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