| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0869 |
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| Symbol | |
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| ID | 5192295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 990874 |
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| End bp | 991713 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585328 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_001266215 |
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| Protein GI | 148546113 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.164985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.267349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCACATT TGCTTTCATG GCGTTACGTC TGTCGGTTCT GTAAGATCGA AGGCCCTGAT
TCCTGCATCT GTGAGCACAA CACCTTGCTG CAAAATATTC GTGTTGTTCT GGTCAATACC
AGCCACCCCG GCAACATCGG CGGCGCTGCG CGTGCCATGA AAAACATGGG CTTGTCGCGT
CTGGTGCTGG TGCAGCCGAA AGAATTCCCC GCCGTGGATG CCAGTGCCCG TGCTTCGGGC
GCCGACGATG TGCTGGATAA CGCCCAGGTG GTCGACAGCC TCGAACAGGC GCTGGTCGGC
TGCAACCTGG TGATGGGCAC CAGCGCCCGC GAGCGCAGCA TTCCCTGGCC GTTGATCGGC
CCGCGTGAAT GCGGTGCCAA GGCGGTGGAG CATGCCAAAG GCGGCGAGGA AATCGCCCTG
GTGTTCGGGC GCGAGCACGC CGGCCTGACC AACGAAGAAC TGCAGCGATG TCACTTCCAC
GTGCACATTC CCTCCAACCC CGACTTCAGC TCGCTGAACC TGGCGGCTGC CGTGCAGGTG
CTTTCCTACG AGGTGCGCAT GGCCTGGCTG GCTGCCGGTG AAGCACCGGG CAAAGTCGAG
AAGGTTGACG CCGCTGAGCT GGCGACCATG GATGAAATGG AGCTGTTCTA CGACCACCTG
GAGAAAACCC TGGTGGGCAT CGGCTTCCTC GACCCCGAAA AGCCCAAGCA CCTGATGCCG
CGCCTGCGAC GGCTGTATGG GCGGGTGGCG GTCGAGCGTT CGGAAATGAG CATTTTGCGC
GGCATCCTCA CCGAGACCCA GAAAGTGGTC CGGGGCGAGC CGCATAAACG GAAGGACTGA
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| Protein sequence | MSHLLSWRYV CRFCKIEGPD SCICEHNTLL QNIRVVLVNT SHPGNIGGAA RAMKNMGLSR
LVLVQPKEFP AVDASARASG ADDVLDNAQV VDSLEQALVG CNLVMGTSAR ERSIPWPLIG
PRECGAKAVE HAKGGEEIAL VFGREHAGLT NEELQRCHFH VHIPSNPDFS SLNLAAAVQV
LSYEVRMAWL AAGEAPGKVE KVDAAELATM DEMELFYDHL EKTLVGIGFL DPEKPKHLMP
RLRRLYGRVA VERSEMSILR GILTETQKVV RGEPHKRKD
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